Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4833 ATGACATCTGAAGAAAATAATGATGCTAGTGATTGGCACTTGGAAGCTCTTAAAGATTATACTTCTATATATGCAGATGAACATGTAAGTTCTTTACCATTTCATGAACCACAATATGAACTCTTTCCACAAGTCCATAACATTGATGAGTTGGTTCCTTTTGAAGGACAAATATTTAACAGTGATGATGATGCTTATGATTTTTATTCTTTATTTGCACGAAAAAATGGATTTTCGATTAGACGTGATCATGTTTATCGATCTTGTATACACGAGTCTGAGCATAATCCAATGGGTGTTTATAAAAGGGAATTTGTTTGTCATCGTGGTGGTATTGTTAAACAACGCAAAATTAATGAAGTGGAAAGTAAAAGGAAACGAAAATCATCAAAATGTAATTGTATGGCAAAAATGTTGGTTGCTAAGAGAACAATTGATTTAGAGGAAAAATGGGTGATTACATATTTCAACAATTATCACAATCATGATTTATTGGATGACAAAGAGGTTCAATTTCTTCCTGCTTATCGTAATATCCCAATTGCTGATCAAAGTCGTATTCTGTTGTTGTCGAAAGCTGGTTGCGCTATAAGTCTTATAACGAGAGTGCTTGAGTTAGAGAAAGGAATAGATACAGGTAGCCTACCATTTTTAGATAAAGATATTCGAAATTTTATTCAATCCCAAAGTAGTATTGGTAAAGAAAATGATGCTTCTGATGTTCTCAAATTATGCAAAAGTTTGAAAGATATTGATGATGACTTCAAATATGAGTTCACTATTGATGAAAATAACAAATTGGAGCATATTATTTGGGCATTTGGTGATTCAATTAGAGCATATGAAACTTTTGGAGATGTTGTAGTTTTTGATACCACATATAGAATAAACCGTTATGATATGCCGCTTGGACTATGGGTTGGTGTTGATAATCATGGAAATTCCATTTTCTTTGGTTGTGTTCTATTGCGAGATGAGAAGATTCCATCTTTCACATGGGCTTTAAAGAATTTCCTTGCTTTTGTCCAAGGAAAATATCCAAAAACAATTCTTACAGACCAAGATCTCGCACTTAAGGAAGCCATTGCAATGGAATTGCCAAACACAAAACATGCATTTTGTATATGGCATATTGTTTCAAAGTTGTCAAGTTGGTTTTCTTTTGCGTTGGGTTCAAGATATAATGACTTTAAACAAGAGTTTCATAGGGTGTATCATTTAGGATGCGGAGAAGATTTTGAACGAGAGTGGCAAGTAATGGTTGCAGAGTTTGGTTTGTTATTGGATAGGCATATTGAGTTGCTCTTTTCCCATCGTAAATTTTGGGCCCTAGCTTATTTGAAGGACTTTTTTTTTGCTGGGATGACTACAACGGGACGCTCAGAATCGATAAATGCATATATCAAAAGATTCTTAGATGCCAAGACAAGTTTGACAGATTTCGTAAATCAAGTTGGGGTTGCTGTCAAAATTAGAAATCAAGCTGGAGAAGAGGCAAGAATGCGTCAAAAGTATCATAATCCTCATATTAGAACATGTTTTCCGATTGAGGAACATGCTGCATCTGTACTTACTCCATATGCCTTTGATTTGCTCCAACACGAGATCGAGTTATCAACAAAATATGCAGCAACTGAAATTGATAACAGTTCTTATATTGTGAAACATCATACTAAAGATGATGGTGGTCGTCTAGTAAGTTGGATAGTAGAAAAAGAGTCAATTCATTGTTCTTGTAAAGAATTTCAATTTTCTGGAATATTATGCAGACATGCTATTCGAGTTCTAACTCTTAAAAATTATTTTAGCCTCCCATCAAAATATCTTCCATTCCGATGGAGACGAGAAAGTTCATTGATCCCAAAATCTAGCCATGTAGTAAATTGCAATGGTGGTTCCTCTGCTGAGTTTCAGTCTCTAATTCGATGTTTGGAAGTTGAATCATCAAAGACAAAAGAACGAGAACAAATTGCTATTAGAGAATTAGAAAAAGTTGTCAAAGAGATAAAAAATATGCCAGAAAGTGAAGAACATGTAATTGATTTGCAACCCGATGATGCAAACAATGATGGTTGTGATGTTGAAAATCCCGTTGTTACAAAAAGCAAAGGTCGACCAAAAGGATCAAGATCAAGACCAAAAGGAGGAGTTGAAGGTGCAAAGAAGCCTCGTTATTGTCATGTTCCAGGTTGTAATCAAACTGATCATGACACAAGAAATTGTCCAAACAAAAAGAAAAATATTAAAGTATTGCCTTCTCAGTCTCCTAATAAGATCATAAAGGGTTGGAAATAG 2295 0.3447 MTSEENNDASDWHLEALKDYTSIYADEHVSSLPFHEPQYELFPQVHNIDELVPFEGQIFNSDDDAYDFYSLFARKNGFSIRRDHVYRSCIHESEHNPMGVYKREFVCHRGGIVKQRKINEVESKRKRKSSKCNCMAKMLVAKRTIDLEEKWVITYFNNYHNHDLLDDKEVQFLPAYRNIPIADQSRILLLSKAGCAISLITRVLELEKGIDTGSLPFLDKDIRNFIQSQSSIGKENDASDVLKLCKSLKDIDDDFKYEFTIDENNKLEHIIWAFGDSIRAYETFGDVVVFDTTYRINRYDMPLGLWVGVDNHGNSIFFGCVLLRDEKIPSFTWALKNFLAFVQGKYPKTILTDQDLALKEAIAMELPNTKHAFCIWHIVSKLSSWFSFALGSRYNDFKQEFHRVYHLGCGEDFEREWQVMVAEFGLLLDRHIELLFSHRKFWALAYLKDFFFAGMTTTGRSESINAYIKRFLDAKTSLTDFVNQVGVAVKIRNQAGEEARMRQKYHNPHIRTCFPIEEHAASVLTPYAFDLLQHEIELSTKYAATEIDNSSYIVKHHTKDDGGRLVSWIVEKESIHCSCKEFQFSGILCRHAIRVLTLKNYFSLPSKYLPFRWRRESSLIPKSSHVVNCNGGSSAEFQSLIRCLEVESSKTKEREQIAIRELEKVVKEIKNMPESEEHVIDLQPDDANNDGCDVENPVVTKSKGRPKGSRSRPKGGVEGAKKPRYCHVPGCNQTDHDTRNCPNKKKNIKVLPSQSPNKIIKGWK* 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4833 764 Pfam MULE transposase domain 287 380 IPR018289 -
Tpr2g4833 764 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 50 678 - -
Tpr2g4833 764 Pfam SWIM zinc finger 572 599 IPR007527 GO:0008270
Tpr2g4833 764 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 50 678 IPR031052 GO:0006355
Tpr2g4833 764 SMART 26again6 575 602 IPR006564 GO:0008270
Tpr2g4833 764 MobiDBLite consensus disorder prediction 676 764 - -
Tpr2g4833 764 Pfam FAR1 DNA-binding domain 67 165 IPR004330 -
Tpr2g4833 764 Coils Coil 652 672 - -
Tpr2g4833 764 ProSiteProfiles Zinc finger SWIM-type profile. 552 600 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4833 Tpr-Chr2 53860764 53864045 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr2g4833 FAR1 3.6e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4833 - - var:108339217 858.981