Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4817 ATGTTAGGAGAAGAAGGAAAAGAGAAACCTTCCCCTATCAGGAGAACCTATTCACGTTCAGTTTCATGGACAGATCGTTCTCCGAATAGCCGTAAACCGCCACCTGGAAATAGTAAACCAAGACCACTTTTACCACCTCTTCAACCTCTCTCAATCAACAAACGTAGCGTTGAAGAATGGCCAAGTGCTGGATCTGATGATCTTGGTGTTTGGCCTCTTCCACAAACTCCAAGAGGTTCTATTACAATCAATGAACCTACCAAAGATTTTCAGTTCAAAAGGGATAAGTTAGCTTTCTTTGACAAAGAGTGTTCAAGAATTGCAGAACATATTTACTTAGGAAGTGACACGGTTGCTAAAAACCATGAACTTCTTAGACAGAAAGGAATAACACATGTGCTTAATTGTGTTGGATTTGTTTGTCCTGAGTATTTCAAAAGTGATTTTGTTTATAAAACACTTTGGTTGCAGGATAGTCCAACAGAGGATATAACATGTATTCTCTATGATGTGTTTGATTACTTTGAGGATGTTAGAGAACAAGGCGGTCGCGTTCTTGTTCATTGTTGTCAAGGGGTTTCTCGATCGACCGCTTTGGTGATTGCTTATCTCATGTGGAGGAAAGGACAAAGCTTTGAAGATGCTTTTCAGTTTGTGAAAACTGCTAGAGGAGTCACAAATCCAAACATGGGTTTTGCTTGTCAACTCTTGCAGTGTCAGAAACGTGTACATGCTATGCCTGCAAGTCCTAGTTCTATTCTAAGGATGTATCGAATGGCTCCTCACTCTCCTTATGATCCTCTTCATCTTGTTCCTAAGATGGTTAACCAACCAGGTTCATTAGCACTTGATTCTCGCGGTGCTTTCATTGTTCATGTTCCTTCTGCTATTTATGTGTGGATTGGGAAAAATTGTAACTTGTTTATGTCATGCAATGCAAAGAGTGCTGCTTTTCAGGTTGTGCGTTACGAGGGAGTAAAGGGTCCAATTCTGAGCATCCATGAAGATCAAGAATCACCCGAGTTTTGGGTTGCTCTTTCTGACGAGCAGCGTTTATCAGATGATTCTGATAAACAACTGGTGTTGTCTTCTGAAAAGATGGAGATTGCTAGTCTAAGGAAAGTTGATGCTTATGATTTGGATTTTGAGATTTTTCACAAGGCAGTGTCTGGTGGGGTTGTTCCGCCTTTTTCTGTAGCTAATGCTGGATCAGAAACTTGTCTTCCTGCTAAAGAACATGGTTGGGCAAGATTGAGGAAGAAATTTGCCAGTGGTGACATGAAAGAAATCTTAACCTCCCCTAAGTGGAAGTGTGATGTGATTATGGAGGAAGAAAAACAAGATTTTGTAGATGATGATGATCCTTTGTCAGCTTCACCGTCATCAAATCATCCCAGTGACTGTGGTTCCCCGGATTCCTTTGAATGTTATCCAACCAGCTTAGGCAAAGCAAAAGATACTGTTGAAGACATGGACTTGTCTGATCATGGTGTTGCTTCTTTGCTGCCACTATCTCCTTCTTTTCCTTGTTTTCTAAGCAGCAGCCCAAAATTCAATTACAAGTCGCCAACACTTTCACCTTCAAGTTCTGATTATGCAAGTTCATTTACATTTTCACCTTCCTCTACCAATTGGTCAGACCTGTCATTCATGTCTTCTCGGCAGCCATCCCCATCTGGCCACGAATCAGTTGAACCATTTTATGTTAAAGATGTGTCTTTCTCAACAAATTCCTCTTTACTTAACAGAGAAGTTCTCTCTTTGCCGTCAGAGTCATTTTCAACTGATCACACCTTGGGAGGGGAAAACTCCTATTTGCCATCGAAAGGATCTTTTCTCTCTATTGCAGCACGAAGAGGGAGTCATATACCACCTCCGATGTTGCTAACCTCTGTCAATGAATCCTCTAAAGTTCGTAAGAACCTGGAGGAATGCACCTACTAA 1944 0.4115 MLGEEGKEKPSPIRRTYSRSVSWTDRSPNSRKPPPGNSKPRPLLPPLQPLSINKRSVEEWPSAGSDDLGVWPLPQTPRGSITINEPTKDFQFKRDKLAFFDKECSRIAEHIYLGSDTVAKNHELLRQKGITHVLNCVGFVCPEYFKSDFVYKTLWLQDSPTEDITCILYDVFDYFEDVREQGGRVLVHCCQGVSRSTALVIAYLMWRKGQSFEDAFQFVKTARGVTNPNMGFACQLLQCQKRVHAMPASPSSILRMYRMAPHSPYDPLHLVPKMVNQPGSLALDSRGAFIVHVPSAIYVWIGKNCNLFMSCNAKSAAFQVVRYEGVKGPILSIHEDQESPEFWVALSDEQRLSDDSDKQLVLSSEKMEIASLRKVDAYDLDFEIFHKAVSGGVVPPFSVANAGSETCLPAKEHGWARLRKKFASGDMKEILTSPKWKCDVIMEEEKQDFVDDDDPLSASPSSNHPSDCGSPDSFECYPTSLGKAKDTVEDMDLSDHGVASLLPLSPSFPCFLSSSPKFNYKSPTLSPSSSDYASSFTFSPSSTNWSDLSFMSSRQPSPSGHESVEPFYVKDVSFSTNSSLLNREVLSLPSESFSTDHTLGGENSYLPSKGSFLSIAARRGSHIPPPMLLTSVNESSKVRKNLEECTY* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4817 647 MobiDBLite consensus disorder prediction 449 472 - -
Tpr2g4817 647 ProSitePatterns Tyrosine specific protein phosphatases active site. 187 197 IPR016130 GO:0016311|GO:0016791
Tpr2g4817 647 MobiDBLite consensus disorder prediction 33 47 - -
Tpr2g4817 647 PANTHER MKPA PROTEIN 14 590 - -
Tpr2g4817 647 CDD DSP 104 238 - -
Tpr2g4817 647 Gene3D Protein tyrosine phosphatase superfamily 83 245 IPR029021 -
Tpr2g4817 647 ProSiteProfiles Dual specificity protein phosphatase domain profile. 103 245 IPR020422 GO:0006470|GO:0008138
Tpr2g4817 647 SMART dsp_5 103 242 IPR020422 GO:0006470|GO:0008138
Tpr2g4817 647 MobiDBLite consensus disorder prediction 1 78 - -
Tpr2g4817 647 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 14 590 - -
Tpr2g4817 647 Pfam Dual specificity phosphatase, catalytic domain 111 241 IPR000340 GO:0008138|GO:0016311
Tpr2g4817 647 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 169 223 IPR000387 GO:0016311|GO:0016791
Tpr2g4817 647 SUPERFAMILY Actin depolymerizing proteins 250 350 - -
Tpr2g4817 647 Gene3D Severin 256 354 IPR029006 -
Tpr2g4817 647 MobiDBLite consensus disorder prediction 15 32 - -
Tpr2g4817 647 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 93 245 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4817 Tpr-Chr2 53726301 53730068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4817 37 139 Protein tyrosine phosphatase (PTP) family AT3G55270 52.586 2.51e-31 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4817 - - lja:Lj6g3v0574850.1 927.932