Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4816 ATGGATCGGCAGGTGTGCACCAATACAACTTCGACACTTACTTTGGGATGGAGGGAGAACCTCATCCACACTGACTTGAAGCCTGAAAATATACTTTTTATTTCCCCAGAATATGTAAAAGTGCCTGACTACAAGGTCATGTTCCGGTCACCAAAAGAGGGAACCTCTTATAAGAGGCTGCCAAAGTCAAGTGCAATTAAGGTTATCGATTTTGGTAGTACGGCCTATGAGCACCAAGATCACAACTATATTGTCTCTACTCGCCATTATAGGGCACCCGAGGTTATTCTTGGTCTTGGTTGGAATTTTCCTTGTGACATATGGAGTATTGGTTGCATTTTGGTTGAGTTGTGTTCGGGAGAAGCTTTATTTCAGACGCATGAAAATTTAGAGCATCTAGCCATGATGGAGAGGGTTTTAGGCCCAATACCTCAGCACATGTTGAAACGAGTAGACCGTGCCGCAGAGAAGTATGTCAGAAGGGGTAGACTGAACTGGCCTGAAGGAGCAGTCTCTCGAGAAAGCATCAAAGCTGTCTTGAAACTACCCCGTCTTCCTAATCTGGTGATGCAGCATGTGGATCACTCAGCCGGAGAACTTCTTGATCTCTTGCAGGGTCTACTTCGGTTTGACCCCATCAGCAGGATGAAGGCTCATGAAGCACTCAGGCATCCCTTTTTTACCGGGGAGCATTACCCGAGGTATTGA 708 0.4605 MDRQVCTNTTSTLTLGWRENLIHTDLKPENILFISPEYVKVPDYKVMFRSPKEGTSYKRLPKSSAIKVIDFGSTAYEHQDHNYIVSTRHYRAPEVILGLGWNFPCDIWSIGCILVELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDRAAEKYVRRGRLNWPEGAVSRESIKAVLKLPRLPNLVMQHVDHSAGELLDLLQGLLRFDPISRMKAHEALRHPFFTGEHYPRY* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4816 235 SMART serkin_6 4 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g4816 235 ProSiteProfiles Protein kinase domain profile. 1 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g4816 235 Gene3D Transferase(Phosphotransferase) domain 1 19 227 - -
Tpr2g4816 235 PANTHER KINASE AFC1 20 234 - -
Tpr2g4816 235 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 20 234 - -
Tpr2g4816 235 SUPERFAMILY Protein kinase-like (PK-like) 20 233 IPR011009 -
Tpr2g4816 235 ProSitePatterns Serine/Threonine protein kinases active-site signature. 21 33 IPR008271 GO:0004672|GO:0006468
Tpr2g4816 235 Pfam Protein kinase domain 6 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4816 Tpr-Chr2 53715460 53718155 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4816 20 231 MAP Kinase Gene Family AT3G59790 27.778 6.50e-19 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Tpr2g4816 Pkinase 9.4e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4816 K08287 - qsu:112037155 392.119