Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4793 ATGGCTGTTGCACCTTTTGGTAATACATCAGCTACTCAATGGGGAATTCGTCCTCAGATTATTGCCAGATCCAGCTCCATAGCCAAATTCGCATCGTCACGCGATAATGTTACAAGCAGGGTAAACTTTATGGCTTCCCCAAGTTCAACCTTTTTTGCTCGGGATTCCTTGCGTTTTAACACAGGTTCATATCAAACTTTGCATCGTCGAAAGGGATCAAGGTTTATAGTTAGAGCTGGCACAGATTTCTACACTGTCCTCGGAGTGTCAAAAAATTCTACTAAAGCTGAAATTAAGACTGCTTATCGGAAGCTAGCCCGGAATTATCATCCAGATGTGAACAAGGAACCTGGTGCAGAAGAGAAATTTAAAGAAATTAGTAATGCATATGAGGTATTATCAGATGATGAGAAACGATCCATATATGACAAATATGGGGAGGCAGGGCTAAAAGGTCAAGGAATGGGCATGGGGGATTTCAGCAATCCTTTTGATCTGTTTGAGACACTATTTGAGGGCATGGGCGGTGGAATGGGCAGCAGAGGCTCTTGGAATGGAGCAGTTGATGGCGAAGATGAGTATTACAGTCTCATTTTGAACTTTAAAGAAGCCGTTTTCGGAGTGGAAAAGGAGATAGAGATTAAGCGACTAGAGAATTGTGGAACCTGCGATGGTTCAGGGGCTAAACCAGGGACTAAATCATCCAGATGTAACACTTGCGGTGGTCAGGGTCGGGTTGTCACACAAACAAGGACTCCGTTAGGTATCTTTCAGCAGTCTATGACTTGCTCGTCTTGCAATGGGACTGGAGAAACTCGAACACCTTGCAGTACATGTTCAGGGGATGGTCGGGTGAGGAAATCAAAGCGGATAAGTCTCAAGGTTCCAGCCGGTGTGGATTCTGGTAGTCGTTTAAGGGTCCGAAATGAAGGTAACACCGGAAGGCGTGGTGGTTCTCCTGGTGACCTCTTTGTTATTCTTGAAGTTATCCCAGATCCCGTGCTTAAACGTGAAGACACAAACATTTTATACTCTTGTAAAATTTCCTATATTGATGCAATCTTGGGGACTACAATTAAGGTTCCAACTGTAGATGGAATGGTGGATTTAAAAATCCCAACTGGGACACAACCAGGATCAACACTTGTTATGGCTAAGAAAGGTGTTCCATTGCTGAATAAAAAGAATATGAGGGGTGATCAAATGGTTCGGGTGCAAGTTGAGATTCCTAAAAAACTGAGCAGCGATGAGAGAAAACTTATCGAGGAACTCTCGGAGTTGAGCAAAGGCGGCAAGACTGCTGCCAGTAGGAGATGA 1317 0.4404 MAVAPFGNTSATQWGIRPQIIARSSSIAKFASSRDNVTSRVNFMASPSSTFFARDSLRFNTGSYQTLHRRKGSRFIVRAGTDFYTVLGVSKNSTKAEIKTAYRKLARNYHPDVNKEPGAEEKFKEISNAYEVLSDDEKRSIYDKYGEAGLKGQGMGMGDFSNPFDLFETLFEGMGGGMGSRGSWNGAVDGEDEYYSLILNFKEAVFGVEKEIEIKRLENCGTCDGSGAKPGTKSSRCNTCGGQGRVVTQTRTPLGIFQQSMTCSSCNGTGETRTPCSTCSGDGRVRKSKRISLKVPAGVDSGSRLRVRNEGNTGRRGGSPGDLFVILEVIPDPVLKREDTNILYSCKISYIDAILGTTIKVPTVDGMVDLKIPTGTQPGSTLVMAKKGVPLLNKKNMRGDQMVRVQVEIPKKLSSDERKLIEELSELSKGGKTAASRR* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4793 438 Pfam DnaJ C terminal domain 195 410 IPR002939 -
Tpr2g4793 438 CDD DnaJ_zf 220 283 IPR001305 GO:0031072|GO:0051082
Tpr2g4793 438 Gene3D - 220 283 - -
Tpr2g4793 438 Pfam DnaJ domain 82 143 IPR001623 -
Tpr2g4793 438 ProSiteProfiles Zinc finger CR-type profile. 207 288 IPR001305 GO:0031072|GO:0051082
Tpr2g4793 438 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 207 287 IPR036410 -
Tpr2g4793 438 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 36 438 - -
Tpr2g4793 438 Gene3D - 330 437 - -
Tpr2g4793 438 Gene3D DnaJ domain 79 183 IPR036869 -
Tpr2g4793 438 SMART dnaj_3 81 138 IPR001623 -
Tpr2g4793 438 TIGRFAM DnaJ_bact: chaperone protein DnaJ 82 426 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Tpr2g4793 438 PANTHER BNAA01G34580D PROTEIN 36 438 - -
Tpr2g4793 438 PRINTS DnaJ domain signature 84 102 IPR001623 -
Tpr2g4793 438 PRINTS DnaJ domain signature 102 117 IPR001623 -
Tpr2g4793 438 PRINTS DnaJ domain signature 118 138 IPR001623 -
Tpr2g4793 438 PRINTS DnaJ domain signature 138 157 IPR001623 -
Tpr2g4793 438 SUPERFAMILY Chaperone J-domain 80 182 IPR036869 -
Tpr2g4793 438 CDD DnaJ 82 135 IPR001623 -
Tpr2g4793 438 ProSitePatterns Nt-dnaJ domain signature. 123 142 IPR018253 -
Tpr2g4793 438 SUPERFAMILY HSP40/DnaJ peptide-binding domain 188 342 IPR008971 GO:0006457|GO:0051082
Tpr2g4793 438 CDD DnaJ_C 191 413 - -
Tpr2g4793 438 Pfam DnaJ central domain 220 283 IPR001305 GO:0031072|GO:0051082
Tpr2g4793 438 Gene3D - 190 325 - -
Tpr2g4793 438 ProSiteProfiles dnaJ domain profile. 82 146 IPR001623 -
Tpr2g4793 438 Hamap Chaperone protein DnaJ [dnaJ]. 79 434 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Tpr2g4793 438 SUPERFAMILY HSP40/DnaJ peptide-binding domain 335 421 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4793 Tpr-Chr2 53384621 53390532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4793 83 145 C2H2 Transcription Factor Family AT1G74250 44.928 3.14e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4793 K03686 - gmx:100786143 734.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4793 2 53384621 53390532 Tpr2g4793 2 53384621 53390532 ECH