Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4736 ATGGCGGCTCTGTTATCTTGCACACCAACTATACTCTCTACTCCGTTCGCAAACCGGACCACAACACATTTTCCACTTCGACCTCACTCCCACACCTTCCCACCCTCCACCAAACGCTTTCTTCGCGGTTCACTTTCCGTTGCCCGTTTCGGATTTCAACCCGGTTTTTTACCCCAACCGGATGACACCGAATTCGTTATTAGGGAATTGTATAATCGAGCGGAGGGTTTTCTTTACACAATTGCTGATGCCGCTGTTTTGTCTTCCGATACGGTGGTAAACACCGCCATCGCCTCCTCCGAGCAGAATAACGATTGGTTTTCATTAATTACCAATTACGTCGAGACTGTTCTCAAGATACTTAAGTATGGGCTTTCTACTTTGCATGTGCCGTATGCGTATGGTTTTGCAATTATAATGCTCGCAGTTCTTCTAAAAGCTGCCATATTTCCGTTGGCGAGAAAAAAGGTAGAATATGACATGGCAATGCAATCTTTGCAACTTAATTTAGAGGCTATCCTAAAACAGGATGCTGGGGATCAGGATACAATTGTACTTGAAACTATTCCGTTATATGAATCAAGCAGCATTGATCCATTACTAGGATGTCTGCTCGTTCTCTTAAAAATACCAGTGTGGATCGGGCTATATCAAGCCTTTTCTAAGATGGCAGATGGGGGACATCTAAGTGAAGGCTTCTTTTGGATACCTTCTCTTTCTGGTCCAACTACAATTGCAGCTCAGCAAAATGGAAATGGTATCTCTTGGCTTTTTCCATTTGTGGATGGTCACCCTCTCCTTGGATGGCCAGATACACTGGCTTACCTTGTGTTGCCTGTTTTGCTGGTTGTCTTTCAATACATTTCTCTCCAAATAATACCATCATCAGAGGGACCATTAGCTTACTTTCGGCGGGGACTATCACTTTATGCCATAGTTGCAAGGGGAGAAGAAGAAGATTCGTCCTTTAGCACATCCTTGACCTTTGGGAGAAAGGATACTGATCCAAACGTGAAGATTTCTCAAGAAGCCTTTGATGTCAATTTTCAAGATACTGATCCCAACGTGGAGAGTTCTAAAGTCTTAGACAATGTCCTTATGTCATTAGTGATTGGTTGTTTTGCTCTTTTAGTTCCTTCTGGTCTTTCCCTTTACTGGTTCACAGATAATGTATTGAACACTTTACAGCAAATATGGCTTCGAAAGTTAGGAGGTGCAACAATTCCTGAGACCAGTTCTAGATGA 1245 0.4289 MAALLSCTPTILSTPFANRTTTHFPLRPHSHTFPPSTKRFLRGSLSVARFGFQPGFLPQPDDTEFVIRELYNRAEGFLYTIADAAVLSSDTVVNTAIASSEQNNDWFSLITNYVETVLKILKYGLSTLHVPYAYGFAIIMLAVLLKAAIFPLARKKVEYDMAMQSLQLNLEAILKQDAGDQDTIVLETIPLYESSSIDPLLGCLLVLLKIPVWIGLYQAFSKMADGGHLSEGFFWIPSLSGPTTIAAQQNGNGISWLFPFVDGHPLLGWPDTLAYLVLPVLLVVFQYISLQIIPSSEGPLAYFRRGLSLYAIVARGEEEDSSFSTSLTFGRKDTDPNVKISQEAFDVNFQDTDPNVESSKVLDNVLMSLVIGCFALLVPSGLSLYWFTDNVLNTLQQIWLRKLGGATIPETSSR* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4736 414 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 134 293 IPR028055 -
Tpr2g4736 414 Pfam 60Kd inner membrane protein 134 402 IPR001708 GO:0016021|GO:0032977
Tpr2g4736 414 PANTHER OXA1 349 409 IPR001708 GO:0016021|GO:0032977
Tpr2g4736 414 PANTHER OXA1 1 297 IPR001708 GO:0016021|GO:0032977
Tpr2g4736 414 PANTHER BNAA09G28180D PROTEIN 1 297 - -
Tpr2g4736 414 PANTHER BNAA09G28180D PROTEIN 349 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4736 Tpr-Chr2 52740609 52746075 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4736 351 406 Chloroplast and Mitochondria Gene Families AT2G28800 55.357 8.42e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4736 K03217 - gmx:100802546 439.884