Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4735 ATGGCGGTTCTGTTACCTTCCACACCAACTATACTCTCTACTCCGTTCCTAAACCGGACAACAACACATTTTCCACTTCTACCTCACTCCCACACCTTCTCACCATCCACCAAACGCTTTCTTCGCGGTTCACTTTCTGTTTCCCGCTTCGGATTTCAACCCGGGTTTTCCCCCCAACCGGATAATGCCGAATTCGTTATCAGGGAATTCTTTAACCGAGCGGAGGGTTTTCTTTACACCATTGCCGATGCCGCTGTTTTGTCTTCCGATACGGTGGTAAACACTGCCATCGCCACCGCTAAGCAGGACAAAGATTGGCTTTCATTAATTACCAATTACGTCGAGACTGTTCTCAAGGTACTTAAGTATGGGCTTTCTACTTTGCATGTGCCGTATGCTTATGGTTTTGCAATTATAATTCTTGCAGCTCTTGTAAATGCTGCCATATTTCCGTTGGTGAGAAAACAGGTAGAATATGACATGGCAATGCAATCTTTGCAACCTCAATTAGAAGCTATCCTAAAACAGTATGCTGGGGATCAGGATACAATCGCATTTGAAACTGCTCGGTTATATAAATCAACCAACATTAATCCTGTACCAGGATTCCTGCCCGTTCCCTTAACAATAGCAGTGTGGATCGGGCTATATCAAGCCTTTTCTAAGATGGCAGATGGGGGACCTCTTAGTGAAGGCTTTTTTTGGATACCTTCTCTTTCTGGTCCAACTACAGTTGCAGCTCAGCAAAATGGAAATGGTATCTCTTGGCTTTTTACTTTTGTGGATGGTCGCCCTCTCCTTGGATGGCCAGATACACTGGCTTACCTTGTGTTGCCTGTTTTGCTGGTTGTCTCTCAATACATTTCTCTCCAAATAATACCATCATCAGAGGGACCATCAATTTATGCCAAAGCTCTAAGGGAAGGAGATGCGTCCTTTAGCATATCATTGTCCTTTGGGAGAAAGGATACTGATCCAAACGAGAAGAGTTCTCAAGAAGCCTTTGATGTCAATTTTCAAGATACTGATCCCAACGTGGAGAGTTCTAAAGTCTTAGACAATGTCCTTATGTCATTAGTGATTGGTTGTTTTGCTCTTTTAGTTCCTTCTGGTCTTACCCTTTACTGGTTCACAGATAATGTATTGAACACTTTACAGCAAATATGGCTTCGAAAGTTAGGAGGTGCAAAACTTCCTGAGACCAGTTCTAGATGA 1215 0.4321 MAVLLPSTPTILSTPFLNRTTTHFPLLPHSHTFSPSTKRFLRGSLSVSRFGFQPGFSPQPDNAEFVIREFFNRAEGFLYTIADAAVLSSDTVVNTAIATAKQDKDWLSLITNYVETVLKVLKYGLSTLHVPYAYGFAIIILAALVNAAIFPLVRKQVEYDMAMQSLQPQLEAILKQYAGDQDTIAFETARLYKSTNINPVPGFLPVPLTIAVWIGLYQAFSKMADGGPLSEGFFWIPSLSGPTTVAAQQNGNGISWLFTFVDGRPLLGWPDTLAYLVLPVLLVVSQYISLQIIPSSEGPSIYAKALREGDASFSISLSFGRKDTDPNEKSSQEAFDVNFQDTDPNVESSKVLDNVLMSLVIGCFALLVPSGLTLYWFTDNVLNTLQQIWLRKLGGAKLPETSSR* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4735 404 Pfam 60Kd inner membrane protein 134 392 IPR001708 GO:0016021|GO:0032977
Tpr2g4735 404 PANTHER OXA1 29 298 IPR001708 GO:0016021|GO:0032977
Tpr2g4735 404 PANTHER OXA1 339 400 IPR001708 GO:0016021|GO:0032977
Tpr2g4735 404 PANTHER BNAA09G28180D PROTEIN 339 400 - -
Tpr2g4735 404 PANTHER BNAA09G28180D PROTEIN 29 298 - -
Tpr2g4735 404 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 134 391 IPR028055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4735 Tpr-Chr2 52729668 52738124 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4735 67 404 Chloroplast and Mitochondria Gene Families AT2G28800 43.824 1.93e-89 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4735 K03217 - gmx:100802546 445.662