Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4734 ATGGCGGTTCTGTTACCTTCCACACCAACTATACTCTCTACTCCGTTCGGAAATCGAACCACAACACATTTTCCACTTCGACCTCACTCCCACACCTTCTTACCCTCCACCAAACGCTTTCTTCGCGGTTCACTTTCCGTTTCCCGCTTCGGATTTCAACCTGGGTTTTTAACCCAACCGGATGACACCGAATTTGTTATCAGGGAATTGTTTAACCGAGCGGAGGGTTTTCTTTACACAATTGCCGATGCCGCTGTTTTGTCTTCCGATACGGTGGTAAACACCGCCATCGCCACCGCTAAGCAGGATCACGATTGGCTTTCATTAATCACCAATTACGTCGAGACTGTTCTCAAGGTACTTAAGTTTGGGCTTTCTACTTTGCATGTGCCGTATGCTTATGGTTTTGCAATTATAATGCTCGCAGTTCTTGTAAATGCTGTTGTATTTCCGTTGAGAATAAAACAGGTAGAATATGCCGAGGTAATGCGATCTTTGCAACCTAAAGAAGAGGCTATTCTAAAACAGTATGCCGGGGATGAGGATACAATTGTACTTGAAACTGTTCGGTTATATGAATCAAGCAGCATTGATCCTGTAGTAGGATTGCTACCCAGTCTCTTAACAATACCAGTGTGGATCGGGCTATATCGAGCCTTTTCTAATATGGCAGATGGGGGACCTATTAGTGAAGGCTTCTTTTGGATACCTTCTCTTTCTGGTCCAACTACAATTGGAGCTTGGCAAAATGGAAGTGGTATCTCTTGGCTTTTTCCTTTTGTGGATGGTCACCCGCCCCTTGGATGGCCAGATACATTGGCTTACCTTGTCTTGCCTGTTTTGTATGTTGTCTCTGAATACATTTCTCGCCAAATAATACAATCATCACAGGGACCATCAGTTTATACCAAAACTCTAGAGAAAGAAGCAGAGTGGTCCTTTGGGGTATCCTTGACCTTTGAGAGAAAGGATACTGATCCCAATGTGAAGAGTTCTCAAGAAATCTTTCATGTCAATATTCAAGATACTGATTTTGATTTCGACATGGAGAGTTTTCAAGTCAAAGATGAGGTCATTTTATTAGTGTTTGGTTGTTTTACTCTTTTAGTTCCTTCAGGTCTTGGACTTTACTGGTTCACATATAATATATTGAGCACTTTACAGAGAATATGGCTTCAAAAGTTAGAAGGTGCAAAAAATCCTTTGAGACATGTTCTAGATGATAATGTGAAAAATGACCAAATGCAGATTCAGAAGTCAGTATCTAAACTAAATTCCACAAAAGTTGAAAAAACTAGAACAGTTGACAAATATACTGCAGAGTGGCCACGACCTGGTGACAGGTTAGTACTAACAATCACAACTACTGGATTAGACCCAGATGACGTGACATTGGATTGA 1401 0.414 MAVLLPSTPTILSTPFGNRTTTHFPLRPHSHTFLPSTKRFLRGSLSVSRFGFQPGFLTQPDDTEFVIRELFNRAEGFLYTIADAAVLSSDTVVNTAIATAKQDHDWLSLITNYVETVLKVLKFGLSTLHVPYAYGFAIIMLAVLVNAVVFPLRIKQVEYAEVMRSLQPKEEAILKQYAGDEDTIVLETVRLYESSSIDPVVGLLPSLLTIPVWIGLYRAFSNMADGGPISEGFFWIPSLSGPTTIGAWQNGSGISWLFPFVDGHPPLGWPDTLAYLVLPVLYVVSEYISRQIIQSSQGPSVYTKTLEKEAEWSFGVSLTFERKDTDPNVKSSQEIFHVNIQDTDFDFDMESFQVKDEVILLVFGCFTLLVPSGLGLYWFTYNILSTLQRIWLQKLEGAKNPLRHVLDDNVKNDQMQIQKSVSKLNSTKVEKTRTVDKYTAEWPRPGDRLVLTITTTGLDPDDVTLD* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4734 466 PANTHER OXA1 26 299 IPR001708 GO:0016021|GO:0032977
Tpr2g4734 466 PANTHER OXA1 344 451 IPR001708 GO:0016021|GO:0032977
Tpr2g4734 466 PANTHER BNAA09G28180D PROTEIN 344 451 - -
Tpr2g4734 466 PANTHER BNAA09G28180D PROTEIN 26 299 - -
Tpr2g4734 466 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 134 394 IPR028055 -
Tpr2g4734 466 Pfam 60Kd inner membrane protein 134 394 IPR001708 GO:0016021|GO:0032977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4734 Tpr-Chr2 52713172 52728331 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4734 62 399 Chloroplast and Mitochondria Gene Families AT2G28800 42.012 6.18e-83 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4734 K03217 - gmx:100802546 506.523