Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4733 ATGGCGGCTCTATTACCTTGCACACCGACTATACTCTCTACTCCGTTCGCAAACCGGACCACAACACATTTTCCACTTCGACCTCACTCCCACACCTTCCCACCCTCAACCAAACGCTTTCTTCGCGGTTCACTTTCCGTTGCCCGATTCGGATTTCAACCCGGTTTTTTACCCGAACCGGAAGATGCTGAATTCGTTATTAGGGAATTGTATAATCGAGCGGAAGGTTTGCTTTATACGATTGCTGATGCTGCTGTTTCGTCTTCTGATACGGTGGTAACCACCACCACCTCCACCGCCAAGCAGAACAACGATTGGTTTTCTGGAATTACCAATTATATGGAGACTATTCTCAAGGTACTCAAGGATGGACTTTCTACTTTGCATGTGCCATATGCTTATGGTTTTGCAATTATAATGCTTACGGTTCTTGTAAAAGCTGCCACATTTCCGTTGACAAAAAAACAGGTAGAATCTGGCTTGGCAATGCGATCTTTGCAACCTCAAGTAAAGGCTATCCAAAAACAGTATGCTGGGGATCAGGAGAGAATTCAACTTGAAACTGCCCGGTTATATAAATTAGCCAACATTAATCCTCTAGCAGGATGCCTGCCTGTTCTCTTAACAACACCAGTGTGGATCGGGCTATATCGAGCCTTTTCTAATGTGGCAGATGAGGGACTTCTTAGTGAAGGCTTCTTTTGGATACCTTCTCTTTCTGGTCCAACTACAACTGCAGCCCGGCAAAGTGGAAGTGCTATCTCATGGCTTTTTCCTTTTGTGGATGGTCACCCTCCCCTTGGATGGCCAGATACGTTGGCTTACCTTGTCTTGCCTGTTTTGTTGGTTATCTCTCAATACATTTCTCTTCAAATAATACAATCATCACAGGCTACTGATCCCAACGTGAAGAGTAATCAAGTCTTAAACAAGGTCCTTCCATTAGTGATCGGTTATTTTGCACTTTCAGTTCCTTCTGGTCTTAGCCTTTACTGGTTCACAAATAATATATTGAGCACTTTACAGCAAATATGGCTTCAAAAGTTAGGAGGTGCAAAAAATCCTTTGAGCCAAGTTCTAGATGATAATGTGAGAAATGACCCAATGCAGATTCAGAAAAATGATCCAATGCAGATTCAGAAGTCAGTATCTAAACTAAATTCCACAAAAGTTGAAGAAGCCAGAAAAGATGAAAAATTGACATCAGAGGGGCCACGACCTGGTGACAGATTTAAGCAATTAATGGAGCTAGAGGCAAGGAAGAAACAGCAGAGAGAAGAAGAAAAAAGGAAGGCTGAGGAAGCAGCAGCTAAAGCTAATCACGAGCAAACAATTGAAGGGAGAAATCAAGCTGTAGGCGACTTAGTTGAAAATTCCCAATCTGTGGGTGCCGATACTGATCCATCCATATCTGGAGTAGTAAATGGTAATCTGTTGAGTAAGGACTTGGAGGGAAATCAGAATTCTACATCTAAATCTGGTTCTGAAAATGATGAAGGTTCTGATAATTTCAATGCAGTAAACAAGAAAAGTCTAGAAAAGGAACCAAGAGAAGTATTAACAACCACAACTACAAACAAGCAACCTCATGGAGAAGATCCAGATCATGTGACAAAGGATTGA 1623 0.4208 MAALLPCTPTILSTPFANRTTTHFPLRPHSHTFPPSTKRFLRGSLSVARFGFQPGFLPEPEDAEFVIRELYNRAEGLLYTIADAAVSSSDTVVTTTTSTAKQNNDWFSGITNYMETILKVLKDGLSTLHVPYAYGFAIIMLTVLVKAATFPLTKKQVESGLAMRSLQPQVKAIQKQYAGDQERIQLETARLYKLANINPLAGCLPVLLTTPVWIGLYRAFSNVADEGLLSEGFFWIPSLSGPTTTAARQSGSAISWLFPFVDGHPPLGWPDTLAYLVLPVLLVISQYISLQIIQSSQATDPNVKSNQVLNKVLPLVIGYFALSVPSGLSLYWFTNNILSTLQQIWLQKLGGAKNPLSQVLDDNVRNDPMQIQKNDPMQIQKSVSKLNSTKVEEARKDEKLTSEGPRPGDRFKQLMELEARKKQQREEEKRKAEEAAAKANHEQTIEGRNQAVGDLVENSQSVGADTDPSISGVVNGNLLSKDLEGNQNSTSKSGSENDEGSDNFNAVNKKSLEKEPREVLTTTTTNKQPHGEDPDHVTKD* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4733 540 PANTHER OXA1 19 472 IPR001708 GO:0016021|GO:0032977
Tpr2g4733 540 Coils Coil 411 442 - -
Tpr2g4733 540 MobiDBLite consensus disorder prediction 388 441 - -
Tpr2g4733 540 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 134 348 IPR028055 -
Tpr2g4733 540 MobiDBLite consensus disorder prediction 371 540 - -
Tpr2g4733 540 MobiDBLite consensus disorder prediction 443 507 - -
Tpr2g4733 540 PANTHER BNAA09G28180D PROTEIN 19 472 - -
Tpr2g4733 540 Pfam 60Kd inner membrane protein 134 348 IPR001708 GO:0016021|GO:0032977
Tpr2g4733 540 MobiDBLite consensus disorder prediction 371 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4733 Tpr-Chr2 52704775 52712176 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4733 62 429 Chloroplast and Mitochondria Gene Families AT2G28800 51.902 1.35e-127 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4733 K03217 - gmx:100802546 729.939