Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4723 ATGGCTTTATTTTCTCTCTTTCTGCTTACACTTCTTGTGTTAATATCATGTTCAGCTTCTCAACTTCAAGAGTTTATAAGCATTGATTGTGGAGGAACAAGAAGTAACTACACTGACACAACCACAGGGATACCATGGATTTCAGATTCTGAGATAATGAAACATGGAGACAAAGTAGAAGTACAAAACCCTAATGGAAACCAAAATCAGTATCAGAAACGCAGAGATTTTCCAACAGATAGTAGAAAATATTGTTATACACTTGAAACTGAAGAGAGAAGAAGGTATTTGGTAAGAGCAACTTTTCAGTATGGAAGTTTGGAAGATGGACATACATACCCTCAGTTTCAACTTTATTTGGATGCAACAAGATGGGCTACTGTGTCAATTTCTGAAGTTGAAAGAATATATGTTAAGGAAATGATCTTTAGGGCGCCTTCGAATTCTGTTGATGTTTGTGTTTGTTGTGCTACAACTGGTTCTCCTTTTATATCTACTCTTGAGCTTAGGCCTTTGAATCTTTCTATGTATGCAACTGATTTTGAGGATGATTTCTTCTTGAAAGTAGTTGCAAGGATTAACTTTGGTGCTCCAACTGAGGATGCTGTCAGGTATCCGGAGGATCCATATGATAGAATATGGGAGTCTGATCTTGTTAAAAGACAAAATTATCTTGTCGGGAAGGCAGCAGGAACAGAAAGAATTAACACAACAAGGAACATAGAAATAGAGACAAGAGAATATCCGCCAGTTAAGGTGATGCAAACTGCAGTTGTTGGCACAAAAGGGTTACTTAGCTATAGAATTAACCTTGAAGACTTTCCTGCTAGAGCTAGAGCTTATGCTTATTTAGCAGAGATTGAAGATTTGGGTCAGAATGAGACTAGGAAATTCAAATTGGCACAACCTTATATAGCTGACTATAGCAATGCAGTGGTGAACATAGCTGAGAATGCTAATGGAAGCTACACTCTTTATGAACCAAGTTATATGAATGTGAGTTTGCAATTTGTTCTTAACTTTTCCTTTAAGAGGACACTAGATTCGACTAGAGGACCTCTATTAAATGCAATGGAAATAAGCAAATATCAAGAAATTGCTTCGAAGACCTCCAAGCAAGATTCAAATTGTCTAAGTGCGTTTGCCTCTTTGTCGGATGAAATTATCCCGAAGAACGAAGGCGATCCTTGCGTTCCAACTTCCTGGGAGTGGGTGAATTGTAGTACTATTACACCTCCAAGAATTACAAAGATAAACTTGACAAGAAAGAATTTGACCGGTGAAATTCCGCGAGAGCTCAGTAACATGGATGCATTGGAAGAACTGTGGTTAGACGGAAACTTACTTACAGGACAACTACCAGACATGAGCAATCTTATCAATCTAAAGATTGTGCATCTAGAGAACAACAAATTGACCGGTTCATTACCGTCTTACCTCGGTAGCTTGCCAAGTTTACAAGCATTGTACATACAGAATAACTCATTTACCGGGGTTATACCAGACGGATTATTAGCTACAAAAATCACTTTCAACTATGATAATAATCCAGGACTACATAAAAAGAACAAAAAGCATTTTCAGTTGATAATAGGAATTTCTATCGGAATACTGGTGATTCTATTCGTCTTGTTCTTAGCAAGTTTGGTGTTATTGCATTACCTGAGGAAAAAGGCTTCTCGAAAGAGAAATGATGAAAAAGGTATTTCAGGACGCAGTACTAAACACATAACTGGATACTCTTTCGGTGTGGATGGAAATTTAATGGATGAAGGTACTGCATACTATATTAATCTCTCGGATTTGAAAGAAGCTACAAACAATTTTTCAAAGAAAATTGGAAAAGGAAGCTTTGGATCTGTCTATTATGGGAAAATGAAAGACGGAAAAGAGATTGCAGTTAAGACTATGACTGATCCATCCAGCCATGGGAACCATCAATTTGCAACCGAGGTAGCTCTCTTATCAAGAATACATCACAGAAACTTGGTTCCTTTGATTGGATATTGCGAAGAAGAATATCAGCATATTCTGGTTTATGAGTATATGCACAACGGCACTCTAAGGGATCACATTCATGAATGTTCGAGTCAGAAGCGATTAGACTGGTTAACTCGTCTTCGAATTGCAGAAGATTCAGCCAAAGGTCTTGAATATTTACACACCGGATGCAATCCTAGTATCATTCACCGAGACGTAAAGACAAGCAACATTCTCCTAGACATTAATATGAGAGCAAAAGTGTCAGACTTTGGACTCTCGAGACTGGCCGAAGAAGATTTAACACATATATCAAGTGTTGCAAGGGGAACTGTGGGCTACTTGGATCCTGAGTACTATGCAAATCAACAATTGACTGAAAAGAGCGATGTATACAGTTTTGGAGTTGTTTTATTGGAACTGATATCTGGAAAGAAGCCTGTATCACCAGAAGATTATGGTCCAGAAATGAATATAGTTCATTGGGCAAGATCTTTAATCCGCAAAGGCGATATAATTAGCATTATGGATCCTTTACTAATTGGAAGTGTGAAAACTGAATCAATATGGAGGGTTGCTGAAATTGCCATGCAATGTGTAGAACCACATGGTGCATCCAGGCCAAGGATGCAAGAAGTGATTTTGGCTATACAAGATGCTTCTAAGATAGAAAAAGGGACAGAAAGTCAACTAAAGATATCATCTTCAAGTGATTCAAAACCACAATCTTCAAGGAAAACTTTGCTTACAAGTTTTCTTGAAATTGAAAGCCCTGATTTATCAAATGGTTGTCTTCCATCAGCAAGATAA 2790 0.3771 MALFSLFLLTLLVLISCSASQLQEFISIDCGGTRSNYTDTTTGIPWISDSEIMKHGDKVEVQNPNGNQNQYQKRRDFPTDSRKYCYTLETEERRRYLVRATFQYGSLEDGHTYPQFQLYLDATRWATVSISEVERIYVKEMIFRAPSNSVDVCVCCATTGSPFISTLELRPLNLSMYATDFEDDFFLKVVARINFGAPTEDAVRYPEDPYDRIWESDLVKRQNYLVGKAAGTERINTTRNIEIETREYPPVKVMQTAVVGTKGLLSYRINLEDFPARARAYAYLAEIEDLGQNETRKFKLAQPYIADYSNAVVNIAENANGSYTLYEPSYMNVSLQFVLNFSFKRTLDSTRGPLLNAMEISKYQEIASKTSKQDSNCLSAFASLSDEIIPKNEGDPCVPTSWEWVNCSTITPPRITKINLTRKNLTGEIPRELSNMDALEELWLDGNLLTGQLPDMSNLINLKIVHLENNKLTGSLPSYLGSLPSLQALYIQNNSFTGVIPDGLLATKITFNYDNNPGLHKKNKKHFQLIIGISIGILVILFVLFLASLVLLHYLRKKASRKRNDEKGISGRSTKHITGYSFGVDGNLMDEGTAYYINLSDLKEATNNFSKKIGKGSFGSVYYGKMKDGKEIAVKTMTDPSSHGNHQFATEVALLSRIHHRNLVPLIGYCEEEYQHILVYEYMHNGTLRDHIHECSSQKRLDWLTRLRIAEDSAKGLEYLHTGCNPSIIHRDVKTSNILLDINMRAKVSDFGLSRLAEEDLTHISSVARGTVGYLDPEYYANQQLTEKSDVYSFGVVLLELISGKKPVSPEDYGPEMNIVHWARSLIRKGDIISIMDPLLIGSVKTESIWRVAEIAMQCVEPHGASRPRMQEVILAIQDASKIEKGTESQLKISSSSDSKPQSSRKTLLTSFLEIESPDLSNGCLPSAR* 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4723 929 ProSitePatterns Protein kinases ATP-binding region signature. 613 635 IPR017441 GO:0005524
Tpr2g4723 929 Pfam Malectin-like domain 28 362 IPR024788 -
Tpr2g4723 929 ProSitePatterns Serine/Threonine protein kinases active-site signature. 728 740 IPR008271 GO:0004672|GO:0006468
Tpr2g4723 929 SUPERFAMILY L domain-like 396 506 - -
Tpr2g4723 929 PIRSF TyrPK_CSF1-R 41 340 - -
Tpr2g4723 929 PIRSF TyrPK_CSF1-R 693 922 - -
Tpr2g4723 929 PIRSF TyrPK_CSF1-R 605 698 - -
Tpr2g4723 929 SMART serkin_6 607 882 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g4723 929 Gene3D Phosphorylase Kinase; domain 1 584 682 - -
Tpr2g4723 929 Gene3D Transferase(Phosphotransferase) domain 1 683 901 - -
Tpr2g4723 929 ProSiteProfiles Protein kinase domain profile. 607 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g4723 929 Gene3D Ribonuclease Inhibitor 366 523 IPR032675 -
Tpr2g4723 929 Pfam Protein tyrosine and serine/threonine kinase 609 874 IPR001245 GO:0004672|GO:0006468
Tpr2g4723 929 SUPERFAMILY Protein kinase-like (PK-like) 593 874 IPR011009 -
Tpr2g4723 929 PANTHER - 12 894 - -
Tpr2g4723 929 PANTHER OS07G0107800 PROTEIN-RELATED 12 894 - -
Tpr2g4723 929 CDD STKc_IRAK 613 874 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4723 Tpr-Chr2 52606222 52612515 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4723 9 929 Receptor kinase-like Gene Family AT1G67720 69.048 0.0 1270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Tpr2g4723 Malectin_like 2.9e-87 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4723 - - gmx:100807148 1530.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4723 2 52606222 52612515 Tpr2g4723 2 52606222 52612515 ECH