Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4696 ATGAAAGACGAAATCAAATCAGAATTCAAAAAAGCAGGGTTCGATCTCGACGAAGAAGAAGAGATTCTAAGCAAATGTCTCCCTTTCTGCATCAACTACAGTCTCACCCCTTCCGATCTCGTCTCAAGCTGGGAAGTTTATTACCTTAACAGACAGCTGGATGAACCAACTGTACAAAATGCTGAAATGGAAGGATTTTTGTTGCATCTACAGAATAATGTGAAAGAAGATATTATAAAGGAGGAAACTGGTTTGCATCTTTATTCTATCGGAGATGTAGAAATGATCTTAAGTAATGACGATGATACAAAGGACGATACTCCCAGCACACCGACGCATAATCGTCAAGATGTTTATTCGCCTATACATGATACACCATCTTTGTACGGGAATGTTTTAGCATCTGGAAAGCCAGCCAATCTGGTTACACCTTTTTCAAAGCGGACGGATAGATTTGCGGTGAAATTCAACATCAACACCATTCCTGATGTAGAAAATGGAAAACAAGAACTTAATCGCGATAATGAAGAGGATGACGAGTTCAGTATTGTTTCAAAAGTCGTAAACCGAAAAAGGTGTTCATTGGTGATTCATGGATCAGGGCCGAAACCAGGTTGCAGATTTATGTATGATAGGACTGAGGATAGGATTAATGCAATAGAAAGCCGGATTAAAAAACATGCAAGAGCACTCATAGCTTCTGGGCTCTATGAAGAACCAACAGACCCTACAATTGCATCACCAAGAAGCTTTTTTTCCGTCGGCATGATTTGTTGTGATGGGGAAGGCCGTCTTAATGAGAAATCTGTCATGTTGCAGAGCAGTATTGAGCATTCTGGAGGGGAATGTGTCCGCCTAGACTTACAACGTTTAAGCCATTATTCAGTTTTCCCTGGCCAGGTAGTTGGAATCGGAGGCCATAATCCTAGTGGGCATTGCCTAGTTGCATCTAAATTGGTTGATTATATACCTACCTCTGTTGCTAACGAGGATTTGAATCCTTCAAAGAAGCAAGCTATGGATAAGGAGAATCAGCCAACTGAGCTGCTTTGTAATCAGAGAGAGTTGTCGATGATTATTGCGGCGGGACCTCTCACTACAACCGACAATTTGTTGTTCGAACCTCTTGTAGAACTGCTGGCATATGCAAAGCGAAGACCTCCACAGCTGCTTGTATTGCTGGGACCATTTATTGATTCTGAACACCCAGACATCAAAAAAGGAACTGTGGACAGGGATTTTGATGAAATATTTCGTTTTGAAGTCTTGAAGAAGTTGGAAGATTATGTAGAATCTATGGGTTCAACAGTACGTGTTCTCCTTGTACCATCTATACGGGATGCTAACCATGATTTTGTTTTTCCTCAGCCTGCATTTGATATCAGTCAACTTCAGATTGCCAGTCTCACTAATCCTGGAATCTTTGAGGCAAACGAGGTCAAAGTTGGTTGCTGCACTTTGGATGTCCTCAAGCAGATCAGTGGGGAGGAGATATCACGAATTGCATCAGATGGAAAGCCTATTGATCGTTTGAGTAGACTTGCAAACCATATTCTTAACCAACAAAGTTTCTATCCACTTTACCCGCCAGCAGAAAGTGTTCCCTTGGACTTTTCTCTGGCGCCAGAAGCCCTTCAACTCTCTTTGGTTCCAGATGTTCTTATCTTACCTTCAGACATCAAGTACTTTGTCAAGGTTCTTAATAACGAAAGCGAAGAGACCAACTGCAAGACATGCATTGCCGTCAATCCAGGAAGATTAGCCAAAGGAGAGGGAGGAGGTACTTTTGTAGAGCTTGATTACAGTGGAGGTCCCGATAAAATTAACGCTTCAATTTTGGCCATATGA 1848 0.4177 MKDEIKSEFKKAGFDLDEEEEILSKCLPFCINYSLTPSDLVSSWEVYYLNRQLDEPTVQNAEMEGFLLHLQNNVKEDIIKEETGLHLYSIGDVEMILSNDDDTKDDTPSTPTHNRQDVYSPIHDTPSLYGNVLASGKPANLVTPFSKRTDRFAVKFNINTIPDVENGKQELNRDNEEDDEFSIVSKVVNRKRCSLVIHGSGPKPGCRFMYDRTEDRINAIESRIKKHARALIASGLYEEPTDPTIASPRSFFSVGMICCDGEGRLNEKSVMLQSSIEHSGGECVRLDLQRLSHYSVFPGQVVGIGGHNPSGHCLVASKLVDYIPTSVANEDLNPSKKQAMDKENQPTELLCNQRELSMIIAAGPLTTTDNLLFEPLVELLAYAKRRPPQLLVLLGPFIDSEHPDIKKGTVDRDFDEIFRFEVLKKLEDYVESMGSTVRVLLVPSIRDANHDFVFPQPAFDISQLQIASLTNPGIFEANEVKVGCCTLDVLKQISGEEISRIASDGKPIDRLSRLANHILNQQSFYPLYPPAESVPLDFSLAPEALQLSLVPDVLILPSDIKYFVKVLNNESEETNCKTCIAVNPGRLAKGEGGGTFVELDYSGGPDKINASILAI* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4696 615 Pfam DNA polymerase alpha/epsilon subunit B 359 565 IPR007185 GO:0003677|GO:0006260
Tpr2g4696 615 Coils Coil 210 230 - -
Tpr2g4696 615 Gene3D - 1 68 IPR043034 -
Tpr2g4696 615 MobiDBLite consensus disorder prediction 99 121 - -
Tpr2g4696 615 PIRSF DNA_pol_alpha_2 1 608 IPR016722 -
Tpr2g4696 615 Gene3D - 337 499 - -
Tpr2g4696 615 Gene3D - 506 611 - -
Tpr2g4696 615 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 1 609 IPR016722 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4696 3 615 Core DNA Replication Machinery Family AT1G67630 59.936 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4696 K02321 - gmx:100795306 955.281