Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4688 ATGAAGACAGGTAGACATGGGGATTATCGCGATGAGGAATTCAGGGATAGTGATTCTGATTTTGGTATTTCAAGGCGTGGGTATAGTAGTAGTTTTAAGGAAGAGTATGATGGAATTAGAAATGGTAAGGTTCGGAGTAGGGATGCTAGAGAGGGGATTATTCAGAGACAGAGAGATATTAGGGAGAGAGAAGTTTTGAATGGCAGTTACCGTTCATCTTCGAGTAGGAGTGACTCTGGTAGCAGTGGTGGCCGTGGTGATAGGCTTGGTTCTAGAAGATGTGAGTTTTCTGTCAAGACTATGGATAGGGAGCCAGGTGAGCTTTCTAGTGCGAGTGAGTCTGATGATGGTGTTGAATCAGAGTCACTGGTCAAATGCCATAAGAAGGTTGTGATGGGAAAAGAGTTTGATTATGGTGTTGAATCGGAACCAGTGTTGAAACGCCATGAGGTTGCAAACAGCAAAGAAAATGGGACTCAGTCTCCATTTGAGAGGAAAAGAAAATTTTCGCCAATAGTATGGGATCAAGATGACAAGAAAGTGAATAATTTATCCAAACTTAAGGTTGTCACAACATCAACTACTCTTCCTCCACCACCTCTATTTCCAAGAGAGTTTCGTAAGTCACCTAATGTTCCTTACAATGGAGTTGAATTTCATCCTCCTGAGAATCCTGAGTTGCCGGCCGCTATGGATCCTTCTATGGTGTCCGAGTCAGTTCAAGATGCTGAATCTGAGTCTCCTGTAGGGTTGGATTCAATGCTGTCAGAGCAGAGGTTGGTTAATGGGCTGGTAGCTGAGCAACCAGAAGCTGAAGATTATGTTCCAACTCGTAATATATCATCTTCAAGGTGGGCATATGGAGACAAATCTTCAGATGACGAAGGTGAAATCATTGATGAGAAGGAATTCCTTAAAAGGAGGAGGCTATCTCCTAAGTCGGCTACGAGAGTAAGAAACAAGACATTGAAACCAAAGGAATCTAAAATTGAAGGTTTTGATAGGGCTAGAACCAAGTCATCTGAATCGGAAGAAAGAGGTAGCACTGGGAGATACTCCGGTGAAGATGATTATCCTGGTACTGAGGCAGAGAAGGATAGCTACATGGAGATTGATGGTGGAGTTAGCAAAAGTGACACAAGTGGTAGTCACACAAATACTGATTCTGAACCTGAAGCTGATTGCAGAGAAAGCATGGAACCTCCGGCTCCACCACAAAGAGTTGTCAACATGCTTCAGGGCTGTAGAAGTGTTGATGAGTTTGAGAGGTTGAACAAGATTGATGAAGGAACATATGGTGTTGTATTTAGGGCCAAAGACAAGAAGACTGGTGAAATAGTGGCATTGAAAAAGGTGAAGATGGAGAAGGAAAAAGAGGGCTTTCCACTGACTTCTCTGAGGGAAATAAACATACTTCTTTCCTTTCATCATCCATTCGTAGTTGACGTTAAGGAAGTAGTGGTAGGTAGTAGCCTTGATAGTATTTTTATGGTTATGGAATACATGGAACATGATCTTAAAGGACTAATGGAGGCAATAAGACAACCATTTAGCCAGAGTGAAGTAAAATGCTTAATGCTCCAGCTGTTAGAAGGTGTGAAGTATCTTCACGACAACTGGGTGCTTCACAGGGATTTGAAGACTTCAAACCTGCTTCTGAATAATAAGGGTGAGTTAAAAATTTGTGATTTCGGATTAGCTCGTCAGTATGGTAGTCCGTTGAAACCATATACATCATTGGTGGTTACTCTTTGGTACAGGGCTCCTGAACTTCTATTGGGGACAAAGCAGTATTCAACAGCCATTGACATGTGGTCCCTGGGTTGTATAATGGCTGAGCTACTGGCCAAGGAACCGTTATTTAATGGGAGGAATGAATTTGATCAACTTAACAAGATCTTCAGAATTCTCGGCACCCCAAATGAAACAATTTGGCCTGGGTTCTCAAAATTACCTCAAGTCAAGGCCAATTATGTTAAGCATCAGTATAATCTACTGCGCAAAAAGTTTCCTGCAACATCATTCACCGGATCCCCAGTTCTTTCTGATTCTGGATTAGATCTGTTGAACAAGCTTCTCACTTATGACCCTGAAAAGGTAAATCATATCTGCTACTTTGATTTTGTAATTACATATTTGTTTCAGCACTTATTGAGAATAAGAACTGTTGTTATTAATGTTCGAAGAGGATCACTGCTGAAGATGCTCTCAACCATGGGTGGTTTCGTGAAGTTCCCCTACCCAAATCTAAAGAATTCATGCCTACATTTCCTGCTCAACATGATAAAGACAGGAGAATGCGAAAATAATAAAGAGTCTACATCTGTTAGAGGAGAAGCACTAGAAGGATTTGCAGTAGGGAGAATCAGGAACTGGTAG 2379 0.4157 MKTGRHGDYRDEEFRDSDSDFGISRRGYSSSFKEEYDGIRNGKVRSRDAREGIIQRQRDIREREVLNGSYRSSSSRSDSGSSGGRGDRLGSRRCEFSVKTMDREPGELSSASESDDGVESESLVKCHKKVVMGKEFDYGVESEPVLKRHEVANSKENGTQSPFERKRKFSPIVWDQDDKKVNNLSKLKVVTTSTTLPPPPLFPREFRKSPNVPYNGVEFHPPENPELPAAMDPSMVSESVQDAESESPVGLDSMLSEQRLVNGLVAEQPEAEDYVPTRNISSSRWAYGDKSSDDEGEIIDEKEFLKRRRLSPKSATRVRNKTLKPKESKIEGFDRARTKSSESEERGSTGRYSGEDDYPGTEAEKDSYMEIDGGVSKSDTSGSHTNTDSEPEADCRESMEPPAPPQRVVNMLQGCRSVDEFERLNKIDEGTYGVVFRAKDKKTGEIVALKKVKMEKEKEGFPLTSLREINILLSFHHPFVVDVKEVVVGSSLDSIFMVMEYMEHDLKGLMEAIRQPFSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNKGELKICDFGLARQYGSPLKPYTSLVVTLWYRAPELLLGTKQYSTAIDMWSLGCIMAELLAKEPLFNGRNEFDQLNKIFRILGTPNETIWPGFSKLPQVKANYVKHQYNLLRKKFPATSFTGSPVLSDSGLDLLNKLLTYDPEKVNHICYFDFVITYLFQHLLRIRTVVINVRRGSLLKMLSTMGGFVKFPYPNLKNSCLHFLLNMIKTGECENNKESTSVRGEALEGFAVGRIRNW* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4688 792 MobiDBLite consensus disorder prediction 32 66 - -
Tpr2g4688 792 MobiDBLite consensus disorder prediction 288 310 - -
Tpr2g4688 792 SUPERFAMILY Protein kinase-like (PK-like) 413 699 IPR011009 -
Tpr2g4688 792 Pfam Protein kinase domain 421 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g4688 792 PANTHER CELL DIVISION PROTEIN KINASE 159 699 - -
Tpr2g4688 792 MobiDBLite consensus disorder prediction 67 84 - -
Tpr2g4688 792 MobiDBLite consensus disorder prediction 32 122 - -
Tpr2g4688 792 MobiDBLite consensus disorder prediction 1 20 - -
Tpr2g4688 792 ProSitePatterns Serine/Threonine protein kinases active-site signature. 541 553 IPR008271 GO:0004672|GO:0006468
Tpr2g4688 792 PANTHER - 159 699 - -
Tpr2g4688 792 ProSiteProfiles Protein kinase domain profile. 421 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g4688 792 MobiDBLite consensus disorder prediction 374 404 - -
Tpr2g4688 792 SMART serkin_6 421 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g4688 792 MobiDBLite consensus disorder prediction 88 110 - -
Tpr2g4688 792 Gene3D Phosphorylase Kinase; domain 1 406 503 - -
Tpr2g4688 792 MobiDBLite consensus disorder prediction 264 361 - -
Tpr2g4688 792 CDD STKc_CDC2L1 415 699 IPR045267 GO:0004674|GO:0005524|GO:0006468
Tpr2g4688 792 Gene3D Transferase(Phosphotransferase) domain 1 504 700 - -
Tpr2g4688 792 MobiDBLite consensus disorder prediction 374 388 - -
Tpr2g4688 792 MobiDBLite consensus disorder prediction 320 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4688 Tpr-Chr2 52193309 52197680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4688 412 699 Core Cell Cycle Gene Families AT5G10270 48.515 4.68e-85 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Tpr2g4688 Pkinase 6.6e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4688 K08818 - gmx:100793729 894.419