Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4670 ATGGTTATGGTAATGGCGGAGGAAGAAGAGAACGCGTTATCGATCGAACCAGAATTTCCGAAGAGTAGAGTGAAGAAGATAATGACTCTAGATGAAGACGTGAAGAGAGTGAGTTCAGAAGCGTTGTTCTTGGTGTCGAAATCTACGGAGCTTTTTTTACAGTTACTTGCTGAAAAGTCTGCGGAAGTTGCAATTGAGAAGAAACGCAAGACGGTGAAGCTTGAACATATAAGAATCGCGGTGAAGAGAAACCGGCCGATATGTGATTTTCTCCTTGATTCACTTCCGATGCCTACTGAAACCGTCAAATCTGATAAACCGGTGGTGGTTGCTGATCGGCCTAAATCTGTTCCGGTTGGTACTCGCCGTATCGATCAAATTTTCCGAAAGTCAGAAGCCCAAGCCCAAGTAGAAGCTGAAGTTGAAGCCCAAGTAGAAGCTGAAGTGGAAGCTCAAATTGAAGCCCAAGTTGAAGCCCAACTAGAAGATGAAATTGAAGTTCAAGTTGCAGCTCAAGCGTCCGAACCGGTGCCGGAACCCATGGAGGAGTCATAG 555 0.4559 MVMVMAEEEENALSIEPEFPKSRVKKIMTLDEDVKRVSSEALFLVSKSTELFLQLLAEKSAEVAIEKKRKTVKLEHIRIAVKRNRPICDFLLDSLPMPTETVKSDKPVVVADRPKSVPVGTRRIDQIFRKSEAQAQVEAEVEAQVEAEVEAQIEAQVEAQLEDEIEVQVAAQASEPVPEPMEES* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4670 184 PANTHER NUCLEAR FACTOR Y, SUBUNIT C13 7 132 - -
Tpr2g4670 184 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 18 81 IPR003958 -
Tpr2g4670 184 Gene3D Histone, subunit A 2 97 IPR009072 GO:0046982
Tpr2g4670 184 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 132 - -
Tpr2g4670 184 SUPERFAMILY Histone-fold 17 84 IPR009072 GO:0046982
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4670 7 135 CCAAT-HAP5 Transcription Factor Family AT5G43250 58.915 5.01e-46 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Tpr2g4670 CBFD_NFYB_HMF 1.9e-19 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4670 - - gmx:100790556 178.718
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4670 2 52037201 52037948 Tpr2g4670 2 52037201 52037948 ECH