Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4666 ATGGAAGAAATACATAGTGAGGTAACATGGGAGAAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGAACAAGCTCAAATTGATATATGGAAATACATATTTGGTGTTGCAGAATTTTCAGTGGTGAGATGTGCAATTGAACTTGGCATAGCTGATGCCATTGAAAAACACAAAAAACCCATGTCACTAATAGAGTTATCAACAACTCTAAAATGTGACCCTTCATATCTTAACCGCATCATGAGATTCCTAGTACATAGGAAAATATTCAAAACCATACATAACAACCATGACACCTATCCTAGTTATGTTCAAACACCACTTTCTCGCCGTTTAATTAAAAACGGCGAGAAAAGCATGGCTGCTTTGTTTTTAGTACAGAGCAGTCCTGTAATGGTAGCACCTTGGCTTAGTTTAAGTGGTCGTGTTTTGATTAATGGCAATCCTTCTTTTGAGAAGGTTCATGGTGAAGATGTGTGGGGTTATGGTGCTTCACATCTTGATCATAGTAATCTTTTTAATGATGCTATGGCTTGTGATGCTAAAATTGTTGTGCCAGCAATTGTTGAAGGTTGTAGTGAGGTTTTTGATGGTGTTGGATCCTTGGTGGATGTTGGTGGAGGGAATGGTACAGCCATGAGTATTCTTGCTAAGGCTTTTCCTTGGATTCATGGAATTAATTTTGATCTTCCTCATGTTATTGAGGTGGCTCCAAAGTGTCATGGGGTGGAACATGTGGCAGGTGACATGTTTACAAGTGTTCCCAAAGCTGATGCTGTAATTATTAAGGTTGTTGCACAGAAACTCAAGGAAGCTGAAATCACCGAGCAGGATTCACTTCTTCTGACAAGGAACCTGCTCCGAATTGCCATATTCAACATTAGCTATATCAGAGGACTATTTCCTGAGAAGTACTTCAATGACAAATCTGTTCCTGCATTAGAGATGAAGATCAAAAAGCTGTTGCCAGTGGATGCTGAGTCTCGTAGACTGATTGATTGGATGGAGAAAGGTGTGTATGATGCCTTACAGAAGAAATACCTGAAGACACTTCTATTCTGTGTGTGCGAAGCAGTGGATGGACCGATGATTGAGGAATATGCATTTTCCTTTAGCTACTCGGATTCTGAGAAGCAAGAGGTGTCTATGAATATCAACCGCACCGGAAGCAAAAAGCAGGGGTCCTTCAAGTGTAACTCGACTACTGAGATTACTCCCCAGCAGATGAGGAGTTCTGCTTGTAAAATGATAAGGACTCTAGTTCAGTTGATGAGAACTCTGGAGAAAATGCCAGAAGAGCGCACCATTCTGATGAAGCTCCTCTACTATGATGATGTGACGCCAGCGGATTATGAGCCTCCTTTCTTCAGGGGCTGCAGTGAAGAAGAAGCGAATCATCCTTGGGTGAAAAATCCATTGAAAATGGAGGTCGGCAATGTGAACAGCAAGCATTTTGTATTAGCTCTGAAGGTGAAGAGTGTGCTTGACCCTTGTGAGGATGACAATGAGGGAATCCAAGATGATATGAGTGATGATTCTATGCACAATAATGAGTATTATGATACTGACAGTGAAGTTGATCATTCTCAAGGGAATCACTATTTTGTTGCACCCATAGAGAAACAGCAAGAGCAGGAAGATACTGGCGAGATTGATGAAGAAAATACCCAGGACCCGGTTGAAGATGAGCAACAATTGGTCCGCGTTAAGGAATGGCTAAACTGTTGTCACCTTGATACCATTGATCTTACTGATGTTCTATCAAACTTTCCAGACATCTCAGTGGTTCTGACTGAAGAGATCATGGACAACCTTGTCAAGGAAGGTGTACTATCAAAAATAGGGAAGGACACCTATACTATTATTAAGGACAAGAAATCCGAATATGATTTCACCACTGTGAAAGAAGAAATTGATGGTCAAATGCCTCCAGTCCTTGATAGAGCTTTACCAGCTGAAGATCTCATATACATGAAGGCTCTCTACCATACTCTTCCAATGGCATATGTGTCAGTCACAAAGCTTCAAAGCTCGTTCCAGGGAGAAGTTAGCCAAGCAGCGGCAAGAAAGTTACTTGACAGAATGACCCAGGATGGGTTTGTTGAGCCTAAAGGCAGCAAAAGACTAGGAAAACGTGTAATCCATTCTGAGTTGACTGAGAAAAAACTCATTGAAGTCCAAAAAGCACTAGGTGTTGCTGAAGCTATGGATGTTGATCACTGTGAACCAAATAGCAAATCCAAACAATCTGGTTACCGTATAAATGGAAGTAACCGCGACATCTCAACATGTGGTGTTCTCCACTCCATTGGATCAGATTTAACAAGAATGAAAGTGACATCTGATACAAATAATACTGACTCCATGAGTGGACTGAAAACGCTAAAGGCAAAAGAGACGGGGAACACCCCAACAAGCAGGCCAGTTGCTTCAAGAGAAAGTTTTGCCCATGGGAAAGAGAACAGCACAGCAAATGGAAATGGGATTGGAAATGAAGGCGACGCAGCTGAGACAATCATCTGCAGCAAGCCATCCCAGGAGAAGCGCCCCAGGAAGACAAGCGCGGTCAAGGAACCTATCCATCAAAATGCGAAGCGTCAGAGATCTCAGGCTCCATGA 2616 0.4209 MEEIHSEVTWEKEEEEEEEEEEQAQIDIWKYIFGVAEFSVVRCAIELGIADAIEKHKKPMSLIELSTTLKCDPSYLNRIMRFLVHRKIFKTIHNNHDTYPSYVQTPLSRRLIKNGEKSMAALFLVQSSPVMVAPWLSLSGRVLINGNPSFEKVHGEDVWGYGASHLDHSNLFNDAMACDAKIVVPAIVEGCSEVFDGVGSLVDVGGGNGTAMSILAKAFPWIHGINFDLPHVIEVAPKCHGVEHVAGDMFTSVPKADAVIIKVVAQKLKEAEITEQDSLLLTRNLLRIAIFNISYIRGLFPEKYFNDKSVPALEMKIKKLLPVDAESRRLIDWMEKGVYDALQKKYLKTLLFCVCEAVDGPMIEEYAFSFSYSDSEKQEVSMNINRTGSKKQGSFKCNSTTEITPQQMRSSACKMIRTLVQLMRTLEKMPEERTILMKLLYYDDVTPADYEPPFFRGCSEEEANHPWVKNPLKMEVGNVNSKHFVLALKVKSVLDPCEDDNEGIQDDMSDDSMHNNEYYDTDSEVDHSQGNHYFVAPIEKQQEQEDTGEIDEENTQDPVEDEQQLVRVKEWLNCCHLDTIDLTDVLSNFPDISVVLTEEIMDNLVKEGVLSKIGKDTYTIIKDKKSEYDFTTVKEEIDGQMPPVLDRALPAEDLIYMKALYHTLPMAYVSVTKLQSSFQGEVSQAAARKLLDRMTQDGFVEPKGSKRLGKRVIHSELTEKKLIEVQKALGVAEAMDVDHCEPNSKSKQSGYRINGSNRDISTCGVLHSIGSDLTRMKVTSDTNNTDSMSGLKTLKAKETGNTPTSRPVASRESFAHGKENSTANGNGIGNEGDAAETIICSKPSQEKRPRKTSAVKEPIHQNAKRQRSQAP* 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4666 871 MobiDBLite consensus disorder prediction 843 863 - -
Tpr2g4666 871 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 254 858 - -
Tpr2g4666 871 Gene3D HORMA domain 265 536 IPR036570 -
Tpr2g4666 871 Coils Coil 5 25 - -
Tpr2g4666 871 MobiDBLite consensus disorder prediction 777 828 - -
Tpr2g4666 871 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 266 IPR029063 -
Tpr2g4666 871 Pfam HORMA domain 278 483 IPR003511 -
Tpr2g4666 871 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 367 IPR016461 GO:0008168
Tpr2g4666 871 ProSiteProfiles HORMA domain profile. 276 490 IPR003511 -
Tpr2g4666 871 PANTHER MEIOSIS-SPECIFIC PROTEIN ASY1 254 858 - -
Tpr2g4666 871 SUPERFAMILY The spindle assembly checkpoint protein mad2 272 497 IPR036570 -
Tpr2g4666 871 SUPERFAMILY "Winged helix" DNA-binding domain 18 115 IPR036390 -
Tpr2g4666 871 Pfam Dimerisation domain 40 84 IPR012967 GO:0046983
Tpr2g4666 871 MobiDBLite consensus disorder prediction 545 559 - -
Tpr2g4666 871 MobiDBLite consensus disorder prediction 541 560 - -
Tpr2g4666 871 MobiDBLite consensus disorder prediction 777 871 - -
Tpr2g4666 871 Gene3D - 10 111 IPR036388 -
Tpr2g4666 871 Pfam O-methyltransferase domain 136 267 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4666 Tpr-Chr2 52005609 52021749 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4666 41 266 Monolignol Biosynthesis Gene Families AT5G54160 35.319 4.60e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4666 K12778 - gmx:100792473 1013.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4666 2 52005609 52021749 Tpr2g4666 2 52005609 52021749 ECH