Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4653 ATGAGTTTGTTACATGTAATTGGTTTTGGTCTAAAAGTTGGGCATCTACTTTTAGTGCTATGTTGTTGGATTGTATCTGTAATTTATATCAACTGGTTCGTTAGTATGGACAATACAAAGATGGGATTTTCAGGAGATGGTGGAAAGATGTGGCTTAAATGGTGGGAGAAGATCTTAGGAAGTACATGTAAAATTCATCAACAGTATTATCAGTGTATTGGGTCTAAGAGAGTTAGGAGAGTTTTGTGGAGGAAATTGTTGTTGGCATGGGTTTTGATTTGGTTTATAGTGTCTTTGTGGATCTTTTGTTTTATGAATTTACAAGTTACTGAGAAGAGGAAAGAGACTTTAGCTAGTATGTGTGATGAAAGAGCTAGGATGTTACAAGATCAGTTTAATGTTAGTATGAATCATATTCAAGCTATGTCTATTCTCATCTCAACTTTTCATCATGCCAAAACTCCTTCTGCCATTGATCAGAAAACTTTTGCAAAGTATACAGAAAGAACTGCTTTTGAGAGGCCACTTACAAGTGGCGTTGCATATGCTGTAAGAGTGCTTCAATCCGAAAGGGAACAATTTGAGAAGCAACAAGGGTGGAGTATTAAGAGGATGGATACTTTGGAACAGAATCCGGTTCATGAGGATGATTATGTCGCAGATGCATTGGAACCATCCCCTATTCATGAAGAATATGCTCCTGTTATCTTTGCACAGGATACAATTTCACACGTCATATCTATCGACGTGCTTTCTGGGAAGGAAGACCGTGAAAATGTGTTGCGTGCAAGAGAATCAGGCAAAGGGGTTTTAACCGCTCCTTTCAGGTTGTTGAAAACAAATCGTTTAGGGGTTATCCTCACATTTGCTGTTTATAAGAGAGATCTTCCATCAAATGCTACCCCAAATGAAAGGATTCAAGCAACTGATGGGTATCTTGGTGGAGTGTTTGAAATAGAGTCATTAGTGGAGAAATTGCTTCAGCAACTTGCTAGCAAGCAAACCGTTCTCGTTAATGTGTATGATACAACAAATCGCACACAACCAATTCCTATGTATGGTTCTGATGTATCAGGTGATGAGTTCTATCATGTGAGCTTTCTTAACTTTGGAGATCCTTTCAGGAAACATGAGATGCACTGCAGGTTCAAACAGAAACCACCATGGCCATGGATGGCAATGGGTACATCGATCGGAATTCTTGTTATTGCACTCCTTGTTGGACATATATTTCACGTAACTGTGAATCGAATTGCTAATGTAGAAGATGATTACCTCAAGATGATTGAACTTAAGAGACGAGCCGAGGCAGCTGATGTTGCTAAATCCCAATTCCTTGCTACTGTTTCGCACGAGATCAGAACTCCAATGAATGGTGTTTTAGGGATGATGAATATGCTAATGGACACTGATCTAGATGTAACACAACAAGAATATGTCAGAACGGCGCAAGGCAGTGGAAAAGCTCTAGTGTCAATTATAAATGAAGTCTTGGACCAGGCAAAGATTGAATCTGGTAAACTAGAGCTTGAGGCTGTGCTGTTCGATATACGAGCAATTATGGATGATGTGTTATCACTATTTTCTGAGAAATCTCAAGGAAAAGGAGTAGAGTTAGCAGTTTACGTCTCGGATCAGGTTCCTCGACAGCTTATAGGTGATCCAGGACGGTTTCGACAAATAATTACGAATCTCATGGGTAACTCAATTAAGTTCACCGACAAAGGGCATATCTTCGTCACTATCTATCTTGTTGAAGAGGTTTTCCATTCAATAGAAGTTGAGAGGGAATCCACTTCAAAAGATACAAAAGATACGTTGAGTGGTTTCCCAATTGCTGATGCTCGCCGGAGCTGGGAAGGATTCCAAGCTTTTAGTCATGAAGGACCTCTTGGTTCTTTCTCATCCTCCTCCAACGATTTCATCAATTTGATTGTATCGGTTGAGGATACAGGCGACGGTATTCCTCTAGAGTCTCAGCCGAAAATATTCACTCCGTTCATGCAGGTAGGTCCATCTATCTCAAGAAAACACGGGGGAACCGGTATTGGTTTAAGCATTAGCAAGTGTTTGGTTGGCCTTATGAATGGAGAAATCGGATTTGTGAGTGAACCGAAGATTGGAAGCACTTTCACATTTACTGCTGTTTTCACCAATGCATGTCCTAATTCAAATGAGTTGAATAAGACTCAGCAAATCAACAACCAACCTCATCCTGCATCCTCAGAGTTTCTTGGTATGGCTGCACTAGTTATTGATCCGAGACCTGTTCGAGCTGAAGTGTCAAGATATCACATCCAAAGGCTCGGCGTTCAAGTCGAAATAGTTTCAGATTTGAAACAAGGTTTGTCCGCCGTAACCGATGGGAATGTAGCTATCAATATGGTCCTGATTGAACAAGAGGTTTGGGAAAGAGACTCAACCATGTCATCACACTTTGTGAATAACATTAGGAAAATTGCTGAAGTTGATAAAGGAATTCCTCCAAAACTATTCATTCTTGTTAATTCTAGTAGTTCTTTTAAAGCTAGTTCTGCGACATCGTGTGTTTATAATCCAACGGTCGTCACAAAACCTTTGAGAGCAAGTATGCTAGCTGCTTCACTACAAAGAGCAATGGGTGTTGGGAACAAAGGGAATCCTCGAAACGGAGAACATCAAGCTTTGTCTCTCAACCATCTTCTCTCTGGGCGAAAGATTCTTATTGTAGATGATAATAGTGTGAATCGTACGGTAGCTGCTGGCGCTTTAAAAAAATATGGAGCTGGTGTGGTTTGCGTAAGCAGTGGAATCGAAGCCATCACTATGCTGACGCCACCCCATGAGTTTGACGCGTGTTTTATGGATATTCAAATGCCTGAAATGGATGGGTTTGAAGCTACAAAAAAAATTCGAGACAAAGAATTGTCTGTTCATCTACCGATTTTGGCTATGACCGCAGACGTAATCCAGGCTACGCACGAGCAATGTTTAAAGCATGGAATGGATGGATATGTTTCAAAACCATTTGAAGCAGAACAACTTTATAGAGAGGTTTCAAAGTTTTTCCAATCATCTTGA 3060 0.4036 MSLLHVIGFGLKVGHLLLVLCCWIVSVIYINWFVSMDNTKMGFSGDGGKMWLKWWEKILGSTCKIHQQYYQCIGSKRVRRVLWRKLLLAWVLIWFIVSLWIFCFMNLQVTEKRKETLASMCDERARMLQDQFNVSMNHIQAMSILISTFHHAKTPSAIDQKTFAKYTERTAFERPLTSGVAYAVRVLQSEREQFEKQQGWSIKRMDTLEQNPVHEDDYVADALEPSPIHEEYAPVIFAQDTISHVISIDVLSGKEDRENVLRARESGKGVLTAPFRLLKTNRLGVILTFAVYKRDLPSNATPNERIQATDGYLGGVFEIESLVEKLLQQLASKQTVLVNVYDTTNRTQPIPMYGSDVSGDEFYHVSFLNFGDPFRKHEMHCRFKQKPPWPWMAMGTSIGILVIALLVGHIFHVTVNRIANVEDDYLKMIELKRRAEAADVAKSQFLATVSHEIRTPMNGVLGMMNMLMDTDLDVTQQEYVRTAQGSGKALVSIINEVLDQAKIESGKLELEAVLFDIRAIMDDVLSLFSEKSQGKGVELAVYVSDQVPRQLIGDPGRFRQIITNLMGNSIKFTDKGHIFVTIYLVEEVFHSIEVERESTSKDTKDTLSGFPIADARRSWEGFQAFSHEGPLGSFSSSSNDFINLIVSVEDTGDGIPLESQPKIFTPFMQVGPSISRKHGGTGIGLSISKCLVGLMNGEIGFVSEPKIGSTFTFTAVFTNACPNSNELNKTQQINNQPHPASSEFLGMAALVIDPRPVRAEVSRYHIQRLGVQVEIVSDLKQGLSAVTDGNVAINMVLIEQEVWERDSTMSSHFVNNIRKIAEVDKGIPPKLFILVNSSSSFKASSATSCVYNPTVVTKPLRASMLAASLQRAMGVGNKGNPRNGEHQALSLNHLLSGRKILIVDDNSVNRTVAAGALKKYGAGVVCVSSGIEAITMLTPPHEFDACFMDIQMPEMDGFEATKKIRDKELSVHLPILAMTADVIQATHEQCLKHGMDGYVSKPFEAEQLYREVSKFFQSS* 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4653 1019 Gene3D CHASE domain 158 387 IPR042240 -
Tpr2g4653 1019 SMART CHASE_2 154 355 IPR006189 -
Tpr2g4653 1019 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 428 507 IPR036097 GO:0000155|GO:0007165
Tpr2g4653 1019 SMART REC_2 898 1012 IPR001789 GO:0000160
Tpr2g4653 1019 SMART HisKA_10 441 506 IPR003661 GO:0000155|GO:0007165
Tpr2g4653 1019 SMART HKATPase_4 553 719 IPR003594 -
Tpr2g4653 1019 ProSiteProfiles Histidine kinase domain profile. 448 719 IPR005467 -
Tpr2g4653 1019 CDD PRTases_typeI 852 927 IPR000836 -
Tpr2g4653 1019 Gene3D - 505 720 IPR036890 -
Tpr2g4653 1019 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 553 717 IPR003594 -
Tpr2g4653 1019 Gene3D - 410 504 - -
Tpr2g4653 1019 PANTHER TWO-COMPONENT HISTIDINE KINASE 54 1018 - -
Tpr2g4653 1019 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 495 714 IPR036890 -
Tpr2g4653 1019 Pfam Response regulator receiver domain 900 1011 IPR001789 GO:0000160
Tpr2g4653 1019 SUPERFAMILY CheY-like 746 874 IPR011006 -
Tpr2g4653 1019 PRINTS Bacterial sensor protein C-terminal signature 644 658 IPR004358 GO:0016310|GO:0016772
Tpr2g4653 1019 PRINTS Bacterial sensor protein C-terminal signature 662 672 IPR004358 GO:0016310|GO:0016772
Tpr2g4653 1019 PRINTS Bacterial sensor protein C-terminal signature 679 697 IPR004358 GO:0016310|GO:0016772
Tpr2g4653 1019 PRINTS Bacterial sensor protein C-terminal signature 703 716 IPR004358 GO:0016310|GO:0016772
Tpr2g4653 1019 Pfam CHASE domain 157 353 IPR006189 -
Tpr2g4653 1019 Pfam His Kinase A (phospho-acceptor) domain 441 506 IPR003661 GO:0000155|GO:0007165
Tpr2g4653 1019 Gene3D - 881 1017 - -
Tpr2g4653 1019 ProSiteProfiles Response regulatory domain profile. 748 873 IPR001789 GO:0000160
Tpr2g4653 1019 PANTHER HISTIDINE KINASE 3 54 1018 - -
Tpr2g4653 1019 CDD REC_hyHK_CKI1_RcsC-like 900 1012 - -
Tpr2g4653 1019 ProSiteProfiles CHASE domain profile. 154 380 IPR006189 -
Tpr2g4653 1019 SUPERFAMILY CheY-like 895 1015 IPR011006 -
Tpr2g4653 1019 CDD HATPase_EvgS-ArcB-TorS-like 558 717 - -
Tpr2g4653 1019 Gene3D - 105 157 - -
Tpr2g4653 1019 ProSiteProfiles Response regulatory domain profile. 899 1016 IPR001789 GO:0000160
Tpr2g4653 1019 CDD HisKA 441 502 IPR003661 GO:0000155|GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4653 Tpr-Chr2 51798475 51804765 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4653 1 1018 Miscellaneous Gene Families AT1G27320 66.349 0.0 1372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr2g4653 CHASE 4.7e-36 CL0165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4653 K14489 - gmx:100801546 1647.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4653 2 51798475 51804765 Tpr2g4653 2 51798475 51804765 ECH