Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr2g4653 | ATGAGTTTGTTACATGTAATTGGTTTTGGTCTAAAAGTTGGGCATCTACTTTTAGTGCTATGTTGTTGGATTGTATCTGTAATTTATATCAACTGGTTCGTTAGTATGGACAATACAAAGATGGGATTTTCAGGAGATGGTGGAAAGATGTGGCTTAAATGGTGGGAGAAGATCTTAGGAAGTACATGTAAAATTCATCAACAGTATTATCAGTGTATTGGGTCTAAGAGAGTTAGGAGAGTTTTGTGGAGGAAATTGTTGTTGGCATGGGTTTTGATTTGGTTTATAGTGTCTTTGTGGATCTTTTGTTTTATGAATTTACAAGTTACTGAGAAGAGGAAAGAGACTTTAGCTAGTATGTGTGATGAAAGAGCTAGGATGTTACAAGATCAGTTTAATGTTAGTATGAATCATATTCAAGCTATGTCTATTCTCATCTCAACTTTTCATCATGCCAAAACTCCTTCTGCCATTGATCAGAAAACTTTTGCAAAGTATACAGAAAGAACTGCTTTTGAGAGGCCACTTACAAGTGGCGTTGCATATGCTGTAAGAGTGCTTCAATCCGAAAGGGAACAATTTGAGAAGCAACAAGGGTGGAGTATTAAGAGGATGGATACTTTGGAACAGAATCCGGTTCATGAGGATGATTATGTCGCAGATGCATTGGAACCATCCCCTATTCATGAAGAATATGCTCCTGTTATCTTTGCACAGGATACAATTTCACACGTCATATCTATCGACGTGCTTTCTGGGAAGGAAGACCGTGAAAATGTGTTGCGTGCAAGAGAATCAGGCAAAGGGGTTTTAACCGCTCCTTTCAGGTTGTTGAAAACAAATCGTTTAGGGGTTATCCTCACATTTGCTGTTTATAAGAGAGATCTTCCATCAAATGCTACCCCAAATGAAAGGATTCAAGCAACTGATGGGTATCTTGGTGGAGTGTTTGAAATAGAGTCATTAGTGGAGAAATTGCTTCAGCAACTTGCTAGCAAGCAAACCGTTCTCGTTAATGTGTATGATACAACAAATCGCACACAACCAATTCCTATGTATGGTTCTGATGTATCAGGTGATGAGTTCTATCATGTGAGCTTTCTTAACTTTGGAGATCCTTTCAGGAAACATGAGATGCACTGCAGGTTCAAACAGAAACCACCATGGCCATGGATGGCAATGGGTACATCGATCGGAATTCTTGTTATTGCACTCCTTGTTGGACATATATTTCACGTAACTGTGAATCGAATTGCTAATGTAGAAGATGATTACCTCAAGATGATTGAACTTAAGAGACGAGCCGAGGCAGCTGATGTTGCTAAATCCCAATTCCTTGCTACTGTTTCGCACGAGATCAGAACTCCAATGAATGGTGTTTTAGGGATGATGAATATGCTAATGGACACTGATCTAGATGTAACACAACAAGAATATGTCAGAACGGCGCAAGGCAGTGGAAAAGCTCTAGTGTCAATTATAAATGAAGTCTTGGACCAGGCAAAGATTGAATCTGGTAAACTAGAGCTTGAGGCTGTGCTGTTCGATATACGAGCAATTATGGATGATGTGTTATCACTATTTTCTGAGAAATCTCAAGGAAAAGGAGTAGAGTTAGCAGTTTACGTCTCGGATCAGGTTCCTCGACAGCTTATAGGTGATCCAGGACGGTTTCGACAAATAATTACGAATCTCATGGGTAACTCAATTAAGTTCACCGACAAAGGGCATATCTTCGTCACTATCTATCTTGTTGAAGAGGTTTTCCATTCAATAGAAGTTGAGAGGGAATCCACTTCAAAAGATACAAAAGATACGTTGAGTGGTTTCCCAATTGCTGATGCTCGCCGGAGCTGGGAAGGATTCCAAGCTTTTAGTCATGAAGGACCTCTTGGTTCTTTCTCATCCTCCTCCAACGATTTCATCAATTTGATTGTATCGGTTGAGGATACAGGCGACGGTATTCCTCTAGAGTCTCAGCCGAAAATATTCACTCCGTTCATGCAGGTAGGTCCATCTATCTCAAGAAAACACGGGGGAACCGGTATTGGTTTAAGCATTAGCAAGTGTTTGGTTGGCCTTATGAATGGAGAAATCGGATTTGTGAGTGAACCGAAGATTGGAAGCACTTTCACATTTACTGCTGTTTTCACCAATGCATGTCCTAATTCAAATGAGTTGAATAAGACTCAGCAAATCAACAACCAACCTCATCCTGCATCCTCAGAGTTTCTTGGTATGGCTGCACTAGTTATTGATCCGAGACCTGTTCGAGCTGAAGTGTCAAGATATCACATCCAAAGGCTCGGCGTTCAAGTCGAAATAGTTTCAGATTTGAAACAAGGTTTGTCCGCCGTAACCGATGGGAATGTAGCTATCAATATGGTCCTGATTGAACAAGAGGTTTGGGAAAGAGACTCAACCATGTCATCACACTTTGTGAATAACATTAGGAAAATTGCTGAAGTTGATAAAGGAATTCCTCCAAAACTATTCATTCTTGTTAATTCTAGTAGTTCTTTTAAAGCTAGTTCTGCGACATCGTGTGTTTATAATCCAACGGTCGTCACAAAACCTTTGAGAGCAAGTATGCTAGCTGCTTCACTACAAAGAGCAATGGGTGTTGGGAACAAAGGGAATCCTCGAAACGGAGAACATCAAGCTTTGTCTCTCAACCATCTTCTCTCTGGGCGAAAGATTCTTATTGTAGATGATAATAGTGTGAATCGTACGGTAGCTGCTGGCGCTTTAAAAAAATATGGAGCTGGTGTGGTTTGCGTAAGCAGTGGAATCGAAGCCATCACTATGCTGACGCCACCCCATGAGTTTGACGCGTGTTTTATGGATATTCAAATGCCTGAAATGGATGGGTTTGAAGCTACAAAAAAAATTCGAGACAAAGAATTGTCTGTTCATCTACCGATTTTGGCTATGACCGCAGACGTAATCCAGGCTACGCACGAGCAATGTTTAAAGCATGGAATGGATGGATATGTTTCAAAACCATTTGAAGCAGAACAACTTTATAGAGAGGTTTCAAAGTTTTTCCAATCATCTTGA | 3060 | 0.4036 | MSLLHVIGFGLKVGHLLLVLCCWIVSVIYINWFVSMDNTKMGFSGDGGKMWLKWWEKILGSTCKIHQQYYQCIGSKRVRRVLWRKLLLAWVLIWFIVSLWIFCFMNLQVTEKRKETLASMCDERARMLQDQFNVSMNHIQAMSILISTFHHAKTPSAIDQKTFAKYTERTAFERPLTSGVAYAVRVLQSEREQFEKQQGWSIKRMDTLEQNPVHEDDYVADALEPSPIHEEYAPVIFAQDTISHVISIDVLSGKEDRENVLRARESGKGVLTAPFRLLKTNRLGVILTFAVYKRDLPSNATPNERIQATDGYLGGVFEIESLVEKLLQQLASKQTVLVNVYDTTNRTQPIPMYGSDVSGDEFYHVSFLNFGDPFRKHEMHCRFKQKPPWPWMAMGTSIGILVIALLVGHIFHVTVNRIANVEDDYLKMIELKRRAEAADVAKSQFLATVSHEIRTPMNGVLGMMNMLMDTDLDVTQQEYVRTAQGSGKALVSIINEVLDQAKIESGKLELEAVLFDIRAIMDDVLSLFSEKSQGKGVELAVYVSDQVPRQLIGDPGRFRQIITNLMGNSIKFTDKGHIFVTIYLVEEVFHSIEVERESTSKDTKDTLSGFPIADARRSWEGFQAFSHEGPLGSFSSSSNDFINLIVSVEDTGDGIPLESQPKIFTPFMQVGPSISRKHGGTGIGLSISKCLVGLMNGEIGFVSEPKIGSTFTFTAVFTNACPNSNELNKTQQINNQPHPASSEFLGMAALVIDPRPVRAEVSRYHIQRLGVQVEIVSDLKQGLSAVTDGNVAINMVLIEQEVWERDSTMSSHFVNNIRKIAEVDKGIPPKLFILVNSSSSFKASSATSCVYNPTVVTKPLRASMLAASLQRAMGVGNKGNPRNGEHQALSLNHLLSGRKILIVDDNSVNRTVAAGALKKYGAGVVCVSSGIEAITMLTPPHEFDACFMDIQMPEMDGFEATKKIRDKELSVHLPILAMTADVIQATHEQCLKHGMDGYVSKPFEAEQLYREVSKFFQSS* | 1020 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr2g4653 | 1019 | Gene3D | CHASE domain | 158 | 387 | IPR042240 | - | |
Tpr2g4653 | 1019 | SMART | CHASE_2 | 154 | 355 | IPR006189 | - | |
Tpr2g4653 | 1019 | SUPERFAMILY | Homodimeric domain of signal transducing histidine kinase | 428 | 507 | IPR036097 | GO:0000155|GO:0007165 | |
Tpr2g4653 | 1019 | SMART | REC_2 | 898 | 1012 | IPR001789 | GO:0000160 | |
Tpr2g4653 | 1019 | SMART | HisKA_10 | 441 | 506 | IPR003661 | GO:0000155|GO:0007165 | |
Tpr2g4653 | 1019 | SMART | HKATPase_4 | 553 | 719 | IPR003594 | - | |
Tpr2g4653 | 1019 | ProSiteProfiles | Histidine kinase domain profile. | 448 | 719 | IPR005467 | - | |
Tpr2g4653 | 1019 | CDD | PRTases_typeI | 852 | 927 | IPR000836 | - | |
Tpr2g4653 | 1019 | Gene3D | - | 505 | 720 | IPR036890 | - | |
Tpr2g4653 | 1019 | Pfam | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 553 | 717 | IPR003594 | - | |
Tpr2g4653 | 1019 | Gene3D | - | 410 | 504 | - | - | |
Tpr2g4653 | 1019 | PANTHER | TWO-COMPONENT HISTIDINE KINASE | 54 | 1018 | - | - | |
Tpr2g4653 | 1019 | SUPERFAMILY | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 495 | 714 | IPR036890 | - | |
Tpr2g4653 | 1019 | Pfam | Response regulator receiver domain | 900 | 1011 | IPR001789 | GO:0000160 | |
Tpr2g4653 | 1019 | SUPERFAMILY | CheY-like | 746 | 874 | IPR011006 | - | |
Tpr2g4653 | 1019 | PRINTS | Bacterial sensor protein C-terminal signature | 644 | 658 | IPR004358 | GO:0016310|GO:0016772 | |
Tpr2g4653 | 1019 | PRINTS | Bacterial sensor protein C-terminal signature | 662 | 672 | IPR004358 | GO:0016310|GO:0016772 | |
Tpr2g4653 | 1019 | PRINTS | Bacterial sensor protein C-terminal signature | 679 | 697 | IPR004358 | GO:0016310|GO:0016772 | |
Tpr2g4653 | 1019 | PRINTS | Bacterial sensor protein C-terminal signature | 703 | 716 | IPR004358 | GO:0016310|GO:0016772 | |
Tpr2g4653 | 1019 | Pfam | CHASE domain | 157 | 353 | IPR006189 | - | |
Tpr2g4653 | 1019 | Pfam | His Kinase A (phospho-acceptor) domain | 441 | 506 | IPR003661 | GO:0000155|GO:0007165 | |
Tpr2g4653 | 1019 | Gene3D | - | 881 | 1017 | - | - | |
Tpr2g4653 | 1019 | ProSiteProfiles | Response regulatory domain profile. | 748 | 873 | IPR001789 | GO:0000160 | |
Tpr2g4653 | 1019 | PANTHER | HISTIDINE KINASE 3 | 54 | 1018 | - | - | |
Tpr2g4653 | 1019 | CDD | REC_hyHK_CKI1_RcsC-like | 900 | 1012 | - | - | |
Tpr2g4653 | 1019 | ProSiteProfiles | CHASE domain profile. | 154 | 380 | IPR006189 | - | |
Tpr2g4653 | 1019 | SUPERFAMILY | CheY-like | 895 | 1015 | IPR011006 | - | |
Tpr2g4653 | 1019 | CDD | HATPase_EvgS-ArcB-TorS-like | 558 | 717 | - | - | |
Tpr2g4653 | 1019 | Gene3D | - | 105 | 157 | - | - | |
Tpr2g4653 | 1019 | ProSiteProfiles | Response regulatory domain profile. | 899 | 1016 | IPR001789 | GO:0000160 | |
Tpr2g4653 | 1019 | CDD | HisKA | 441 | 502 | IPR003661 | GO:0000155|GO:0007165 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr2g4653 | Tpr-Chr2 | 51798475 | 51804765 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr2g4653 | 1 | 1018 | Miscellaneous Gene Families | AT1G27320 | 66.349 | 0.0 | 1372 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Tpr2g4653 | CHASE | 4.7e-36 | CL0165 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr2g4653 | K14489 | - | gmx:100801546 | 1647.87 |