Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4650 ATGCTACCTGGTTTGCAATACAATATCAATGATCTGTTTCAAGAAGCTAAGAAAAGATGGCTCAAACCTATAGAGGTGTATTACATTTTGCAGCATCACGACATGTGCGAGTTCACCAATATGCCCCTTAACCGGCCTCGTGGTGGAGCTGTTTATTTGTTTAATAAAAGAGTCATGCGTTTCTTTCGAAAAGATGGTCATAATTGGCGGAAGAAAAAAGATGGAAGAACTGTGGCAGAAGCACATGAACGGCTTAAGGTTGGAAATGTTGAAGCCCTAAACTGTTACTATGCACATGGAGAGGAGAACCGTAGTTTCCAGAGGCGAAGCTATTGGATGTTGAACCCGGAATATGAGCATGTTGTTCTCGTGCATTACAGAGATACAAATGAGGGGACATCCAATTCTGGACCAGCCACACAACTGTCACCGTTTAGTCAGAGTCGCAGCTCATATACTACTCAAAACCCCGAGACTACATCCATAGTTGGTGATTCATGTGAACCTAATCAGAATTTCTCCAGTCCCGGGTCCTTAGAAGTCACCTCTGATATAGTCATCATGAATAATGGAATGGATCACTTGGAGAAAACAAATGCACAAGCTTTCCGCCAATTAGAGGAACAGTTAAGTTTGAATGACGAAAGCTTCACAGAAATTTCTCCATTTTATAGGGAACATGAAGTTCCACAGGAAATATGTGCCAGACCAGATGATCATGAACAACTATATGATGGATATAATGGAACAAAAGTTGGCAGTGGTAATCATTATCATGAATTACTTGACCATAGTTGCCCTGGTGGGAATGAGAAAACATTATATTGGACAGAAATGCTGGAGTCAAGCAAGTTCTCATCTGTGATCAAGTTACCAGAACAACATGCATACAAGGCATTTGAAAATGAAAAGCCATTACCTTCTCCAGGAAGAGAAATGATTGCCAACCAGGAAATCAGTTACTGGCTACACCCCAACAATAATAATGATGAGAATTCTGTCTTTTCATTAACTCAACATATTGGTGGAGTCAACATGTCTCCATATTCTTCGGTAGAAACTCAAGGAACTAATTCTGACTACTATGAAAGATTGTTTGACCAAAGCCAAATTCAAGAACCTCTGGATGCATATTCAAGGTTCGCTGGTGGACAGAAATTTACAATTATGACCGTCTCCCCAGAATATTGTTATGCCACTGAGGCATCAAAGGTGATCATTATTGGATCTTTTCTCTGCCTTCCCATGGATTCTACCTGGGCTTGTATGTTTGGTGATGTTGAAGTTCCTGCTGAAATACTTAAGGATGGCGTAATCTGTTGTGAGGCTCCATCCCATCTTGTTGGAAAGGTTTCTCTGTGCATTACTTCAGGAAATAAGGAACCATGCAGTGAAGTCAAAGAGTTTGAATTTCGTAATAAGACCAATAGTTGCACTCACTGTAATAGTTTGGAAACAGAAGCTGCCAGAAGTCCAGAAGAGCTGTTATTACTTGTTCGATTTGCAGAAATGCTCCTTTCTACTTCAATTATGAAGGATGACAGCACAGAATCTGGAAGCCATCTTTCAACAGAACAGAAAGCAGATGATGATTCATGGAGCCATATTATAGACGCTCTCCTAGTTGGCAACGAAACTTCATCTGGTACTATTGATCGGATTCTTCAAGAGCTGCTGAAGGATAAGCTGCAGCACTGGCTTTCTTGCAGATCCAATGAGCGAGATGAAGGGGCAGGTTGTTCTTTGTCCAAGAAAGAGCAAGGGATTATACACATGGTTTCTGGATTGGGTTTCGAGTGGGCCCTGAACCCCATTCTCAGTTATGGTGTGAATGTTAATTTCCGTGACATCAATGGAAGGACTGCCCTTCATTGGGCTGCACGGTTCGGAAGGGAAAAAATGGTTGCATCGCTTATTGCTGCTGGTGCATTTGCTGGAGCAGTGACAGATCCAACTTCACAAGATCCAAATGGTAAAACTGCTGCAACTATTGCGACCAGCAATGGCCACAAGGGACTGGCAGGTTATCTTGCAGAGGCAGATCTAACAAGTCATCTGTCATCCCTCACATTGGAAAAGTGTGAAGTTCCTAAAGATTCTTCTGAGCTTGAAGCTGAGTTAACTGTCAGAAGTGTGTCTAAGAAAAATCTCGAAGCCAGTGATGATGAGGTTTCACTAAAGAATACCTTGGGTGCTGTCAGAAATGCATCTCAGGCAGCTGCACGGATACAGGCTGCTTTTCGTGCACATTCTTTCAAAAAACGGATAGAGAGAGAAGCTGCCTCTGCCACTTGTCTAAATGGATATGTCAATGGTGTAGGTAGCATTGGTGGATATGCTAGGAGCTTGCGTGATTGCAATTCGGCTGCCTTATCAATTCAGAAGAAGTATCGGGGTTGGAAAGGTCGCAAAGACTTCTTAGCTTTGCGCCAAAAAGTTGTAAAGATACAGGCTCATGTGAGGGGTTACCAGACTCGGAAGCAATACAAGGTGATGATATGGGCAGTTGGAATCTTGGACAAGGTTGTGCTAAGATGGCGGAGAAAACGGGTTGGTTTGCGAAGCTCTCCCCAAGAAAATAATTCAAAAGAAGAAAGTGATGATGAAGATTTTCTAAAGGCGTTCAGGCAAGAGAAAGTACATGTAGCAATTGAAAAGGCTTTGGGGCGGGTGCGTTCCATGGTCCATTCTCCGCATGCTCGTCAGCAATATAATCGCTTGCTTGAGATGTATCGTAAAGCCAAGGCTGAAACACTTTTATCAACTTCTTTACAGAATGCTTGGAATATTGAAGAAGATGAAACACTTTTATCAACTTCTGTACAGAATGCTTGGAATATTGAAGAAGATGATGATTTATTCCAATTTCCATGGGAAACACTCTAG 2886 0.4207 MLPGLQYNINDLFQEAKKRWLKPIEVYYILQHHDMCEFTNMPLNRPRGGAVYLFNKRVMRFFRKDGHNWRKKKDGRTVAEAHERLKVGNVEALNCYYAHGEENRSFQRRSYWMLNPEYEHVVLVHYRDTNEGTSNSGPATQLSPFSQSRSSYTTQNPETTSIVGDSCEPNQNFSSPGSLEVTSDIVIMNNGMDHLEKTNAQAFRQLEEQLSLNDESFTEISPFYREHEVPQEICARPDDHEQLYDGYNGTKVGSGNHYHELLDHSCPGGNEKTLYWTEMLESSKFSSVIKLPEQHAYKAFENEKPLPSPGREMIANQEISYWLHPNNNNDENSVFSLTQHIGGVNMSPYSSVETQGTNSDYYERLFDQSQIQEPLDAYSRFAGGQKFTIMTVSPEYCYATEASKVIIIGSFLCLPMDSTWACMFGDVEVPAEILKDGVICCEAPSHLVGKVSLCITSGNKEPCSEVKEFEFRNKTNSCTHCNSLETEAARSPEELLLLVRFAEMLLSTSIMKDDSTESGSHLSTEQKADDDSWSHIIDALLVGNETSSGTIDRILQELLKDKLQHWLSCRSNERDEGAGCSLSKKEQGIIHMVSGLGFEWALNPILSYGVNVNFRDINGRTALHWAARFGREKMVASLIAAGAFAGAVTDPTSQDPNGKTAATIATSNGHKGLAGYLAEADLTSHLSSLTLEKCEVPKDSSELEAELTVRSVSKKNLEASDDEVSLKNTLGAVRNASQAAARIQAAFRAHSFKKRIEREAASATCLNGYVNGVGSIGGYARSLRDCNSAALSIQKKYRGWKGRKDFLALRQKVVKIQAHVRGYQTRKQYKVMIWAVGILDKVVLRWRRKRVGLRSSPQENNSKEESDDEDFLKAFRQEKVHVAIEKALGRVRSMVHSPHARQQYNRLLEMYRKAKAETLLSTSLQNAWNIEEDETLLSTSVQNAWNIEEDDDLFQFPWETL* 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4650 961 ProSiteProfiles Ankyrin repeat profile. 618 650 IPR002110 GO:0005515
Tpr2g4650 961 SUPERFAMILY E set domains 388 472 IPR014756 -
Tpr2g4650 961 ProSiteProfiles Ankyrin repeat region circular profile. 618 643 - -
Tpr2g4650 961 PANTHER CALMODULIN-BINDING PROTEIN 1 958 - -
Tpr2g4650 961 SMART CG_1_2 12 130 IPR005559 GO:0003677
Tpr2g4650 961 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 958 - -
Tpr2g4650 961 Pfam IQ calmodulin-binding motif 788 806 IPR000048 GO:0005515
Tpr2g4650 961 Pfam IQ calmodulin-binding motif 811 830 IPR000048 GO:0005515
Tpr2g4650 961 MobiDBLite consensus disorder prediction 132 173 - -
Tpr2g4650 961 ProSiteProfiles IQ motif profile. 809 833 IPR000048 GO:0005515
Tpr2g4650 961 ProSiteProfiles IQ motif profile. 736 764 IPR000048 GO:0005515
Tpr2g4650 961 ProSiteProfiles IQ motif profile. 787 815 IPR000048 GO:0005515
Tpr2g4650 961 SUPERFAMILY Ankyrin repeat 588 680 IPR036770 -
Tpr2g4650 961 SMART iq_5 785 807 IPR000048 GO:0005515
Tpr2g4650 961 SMART iq_5 808 830 IPR000048 GO:0005515
Tpr2g4650 961 SMART iq_5 735 757 IPR000048 GO:0005515
Tpr2g4650 961 Gene3D - 786 833 - -
Tpr2g4650 961 SMART ANK_2a 657 686 IPR002110 GO:0005515
Tpr2g4650 961 SMART ANK_2a 618 650 IPR002110 GO:0005515
Tpr2g4650 961 Gene3D - 495 690 IPR036770 -
Tpr2g4650 961 Pfam CG-1 domain 15 128 IPR005559 GO:0003677
Tpr2g4650 961 Pfam Ankyrin repeats (3 copies) 602 682 IPR002110 GO:0005515
Tpr2g4650 961 Gene3D Immunoglobulins 382 477 IPR013783 -
Tpr2g4650 961 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 736 837 IPR027417 -
Tpr2g4650 961 ProSiteProfiles CG-1 DNA-binding domain profile. 9 135 IPR005559 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4650 Tpr-Chr2 51767419 51777783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4650 5 957 CAMTA Transcription Factor Family AT1G67310 48.137 0.0 830
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Tpr2g4650 CG-1 5.8e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4650 K21596 - gmx:100791430 1236.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4650 2 51767419 51777783 Tpr2g4650 2 51767419 51777783 ECH
Tpr2g4650 2 51767419 51777783 Tpr3g1299 3 11473714 11481834 PCT