Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4646 ATGCTAAAATTCTTGAGGAAAATCTTATCCCTTCAATTGAAGGATTGTATCAAGAAAAGGAGTGAACATGGTAAGAACTTAGTAGCTGTGCAGTTGCCAAATTGCAATGTTTGTGTAGAGGAAAACAAACAATGCAATTGTGATCACATCATTGTTGAGGATAGAAAGAACACTAGTGTTGTAGAAGGCGCCAATGTCGATGTGAATGCTGATAGTTCTTTTGTTCATGCTGTCATCAACATGGTTGGAATGCTCATAGGTTTAGGGCAATTATCAACTCCATATGCTGTTGAAAAAGGAGGGTGGGCATCTGCATTCTTGCTTGTAGGACTTGGAGTAATGTGTGCTTATACCTCTCATATACTTGGAAAATGTCTTGAAAAGAATCCAAACTTAGCAAGTTATGTGGATATTGGGAATCAAGCATTTGGATCAAAAGGAAGATGCATAGTTGCAACATTCATCTACATGGAAATCTTTATGGCACTTGTTTCCTACACCATCTCATTACATGACAACTTGATCATAGTATTTTTGGGGACACATTTGAAGCTGAAATTGGCTATGTTATCAACATCACAAATCTTAACTTTGGTGGCAATCTTGATAGCTCTACCTAGTTTGTGGATCAGAGATATGTCTTCTATATCTTTCCTTTCAACTGGTGGAATTCTTATGTCTCTTCTCATTTTTATGTGTGTAGCAGTTACTGCAATTTTTGGAGATGTTCAAGCTAATAATCATAGTATACCAGCTTTGAAGTTACATAATATTCCATCAATATCTGGTCTTTATGTCTTTGGTTATGGAGGACATATTGTTTTCCCTGATTTATATAAATCCATGAAAAACCCTTCCAAGTTCACTAAGGTTTCAATAGTGAGCTTCACAGTAGTTACAGCACTATACACCTCAATGGGATTCATGGGTGCAAAAATGTTTGGAAACAATGTTCAATCTCAGATAACTCTCAACATGCCACCAAATCAAATAATAACAAAGATTGCTCTTTGGGCAACAGTGTTGACACCAATGACCAAATATGCACTTGAATTTGCACCCTTTGCAATTCAGCTAGAACACTCACTTCCAAATTCTCTTAGTGGCAGGACAAAATTAGTAATAAGGGGTTGTGTGGCTTCATTTTTGCTATTGACCATACTAACCCTTGCTTTATCAGTGCCATATTTTGAGCATGTTCTAAGTCTCACTGGTTCACTAGTTAGTGTAGCCATTTGTTTGATTTTTCCATGTGTTTTCTATATGAAGATTTTTTGGGGTAAAATAACAAGGCCTCTCTTAGTCCTTAATTTTTTTCTAGTCATGTTTGGGTTTCTTCTTGGGGTGATGGGCACCCTTTCCTCCATAGAGTTAATATTGAAAAAATTTCTATCACATCATTCAACTTGA 1410 0.3638 MLKFLRKILSLQLKDCIKKRSEHGKNLVAVQLPNCNVCVEENKQCNCDHIIVEDRKNTSVVEGANVDVNADSSFVHAVINMVGMLIGLGQLSTPYAVEKGGWASAFLLVGLGVMCAYTSHILGKCLEKNPNLASYVDIGNQAFGSKGRCIVATFIYMEIFMALVSYTISLHDNLIIVFLGTHLKLKLAMLSTSQILTLVAILIALPSLWIRDMSSISFLSTGGILMSLLIFMCVAVTAIFGDVQANNHSIPALKLHNIPSISGLYVFGYGGHIVFPDLYKSMKNPSKFTKVSIVSFTVVTALYTSMGFMGAKMFGNNVQSQITLNMPPNQIITKIALWATVLTPMTKYALEFAPFAIQLEHSLPNSLSGRTKLVIRGCVASFLLLTILTLALSVPYFEHVLSLTGSLVSVAICLIFPCVFYMKIFWGKITRPLLVLNFFLVMFGFLLGVMGTLSSIELILKKFLSHHST* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4646 469 PANTHER AMINO ACID TRANSPORTER AVT1H 17 465 - -
Tpr2g4646 469 PANTHER OS05G0424000 PROTEIN-RELATED 17 465 - -
Tpr2g4646 469 Pfam Transmembrane amino acid transporter protein 72 456 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4646 Tpr-Chr2 51725368 51728051 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4646 35 467 Amino Acid or Auxin Permease AAAP Family AT5G16740 59.862 1.21e-170 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4646 - - lang:109342470 657.521