Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4641 ATGAATATTTTTTGTGATTCAAGTGTTGGATTAGAAAAATTGAGTGACTATGATGATGATCTCTACAAATTCTATCATCATGAAGAGTCTCAAATTACCACAAATTCATATGGTTACAAGTTAGATTCTCAACTGAGAAAAAATGTCATAGATTGGTTGATCCAAACACATCATGAACAAAAACTCATGCCAGAGACTCTTTACCTCTGTGTCAACATCCTTGATCGTTTCCTTTCCAAATCCAGTTTTGAAGTTGCAACAAAAGATAAACTTAAGCTTCTTGGTTTGTCCTCAATGTTGTTGGCTTCAAAATATGAACAAAGAAGTGCAATTAGAGTTTATGATATTGAATATATGGCTGAATATTCTTATTTTCCTGATGAGATATGTGTAATGGAAAAACGTATATTGCAACAACTTGATTGGATTTTAACCGTTCCAACACCTTACGTTTTTCTTATTAGAAACATAAGGGCAAGTCTTTTATCAGATGAAGACAAGATCATGGAGAATATGGCGTTTTTCTTTTCTGAACTCAGCTTGACACATTATTATGTTATGTGTGATTATAAACCTTCTACGATTGCTGCTTCTGCTGTGTATTGTGCAAGAATTATTCTTGGAAGATACCCTTATTGGAGCAATGAATTGAAGATGTGTACAGGGTATTCTGAAGAGAAGTTATTGTATTGTGTCAAGGTTATGATGGAGTTATGCTATGAAACTTGTAAAGAAGGAACCATGGAAGTTTTCAAGAAGTTTTCCAGTTTAAATTGGTCTAGGGTTTCATGTGTTGCCCAGGAAGTTCTCGAAGAAGCTGTCTTATCTTAA 831 0.3381 MNIFCDSSVGLEKLSDYDDDLYKFYHHEESQITTNSYGYKLDSQLRKNVIDWLIQTHHEQKLMPETLYLCVNILDRFLSKSSFEVATKDKLKLLGLSSMLLASKYEQRSAIRVYDIEYMAEYSYFPDEICVMEKRILQQLDWILTVPTPYVFLIRNIRASLLSDEDKIMENMAFFFSELSLTHYYVMCDYKPSTIAASAVYCARIILGRYPYWSNELKMCTGYSEEKLLYCVKVMMELCYETCKEGTMEVFKKFSSLNWSRVSCVAQEVLEEAVLS* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4641 276 PIRSF Cyclin_A_B_D_E 6 275 IPR039361 -
Tpr2g4641 276 SMART cyclin_7 51 138 IPR013763 -
Tpr2g4641 276 SMART cyclin_7 151 237 IPR013763 -
Tpr2g4641 276 Pfam Cyclin, C-terminal domain 147 264 IPR004367 -
Tpr2g4641 276 Gene3D - 139 274 - -
Tpr2g4641 276 PANTHER CYCLINS 13 267 IPR039361 -
Tpr2g4641 276 SMART Cyclin_C_2 147 268 IPR004367 -
Tpr2g4641 276 CDD CYCLIN 45 137 IPR013763 -
Tpr2g4641 276 Pfam Cyclin, N-terminal domain 21 144 IPR006671 -
Tpr2g4641 276 PANTHER CYCLIN-B1-4 13 267 - -
Tpr2g4641 276 SUPERFAMILY Cyclin-like 146 265 IPR036915 -
Tpr2g4641 276 CDD CYCLIN 145 236 IPR013763 -
Tpr2g4641 276 Gene3D - 33 138 - -
Tpr2g4641 276 SUPERFAMILY Cyclin-like 15 142 IPR036915 -
Tpr2g4641 276 ProSitePatterns Cyclins signature. 46 77 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4641 Tpr-Chr2 51658154 51659250 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4641 16 255 Core Cell Cycle Gene Families AT2G26760 39.918 9.09e-57 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4641 K21777 - twl:119990905 212.231