Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4636 ATGAAAATGGAAAAGTATAAGAAGGTTGTGAGTGCTGTTTTGACTCCTAAAGTTGGGTATGGTTTGGCCGATGAGCTGAAACGGGCAGGGTTTTGGGTTCAAACTGTGTTGGATAGGCCGCAAGCTGCAGATATTGCGTTGCAAAAGCATATGGTGGATATGATGGATCATAGGCGGGTTGAGTGTGTGGTTCTTGTATCCGATGATTCTGATTTTGTTGATGTAATAAAGGAGGCAAAACTACGGTGTCTCAAGACTATTGTTATTGGGGATACTAGTAGTGACAGAGTCTTGAAAAGGACTGCTGATACTGCCTTTTCTTGGGAGGAAATTTTGACGGGGAAGGCTAAGAAGGAGGATGTATCCGTTGTGGAAAATTGGAAATATCGTGATATGTTGAAAAGGTTGGAGTGGACGTACAATCCTGATGTGGATACAAAGAAACTCAATCTGGATGATGCGGTTGCTGAAACATCTGGAGATGATGATGTTGAAGATATCTTCGGCGATGTTGATGATGACTACAAGGATGACAGAGGTGCTTGGTGGGAATTAGACTCCGATGATAACGATGTTAGAACTGGATAA 588 0.4252 MKMEKYKKVVSAVLTPKVGYGLADELKRAGFWVQTVLDRPQAADIALQKHMVDMMDHRRVECVVLVSDDSDFVDVIKEAKLRCLKTIVIGDTSSDRVLKRTADTAFSWEEILTGKAKKEDVSVVENWKYRDMLKRLEWTYNPDVDTKKLNLDDAVAETSGDDDVEDIFGDVDDDYKDDRGAWWELDSDDNDVRTG* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4636 195 Pfam NYN domain 23 106 IPR021139 GO:0004540
Tpr2g4636 195 PANTHER ZINC FINGER (C2H2 TYPE) FAMILY PROTEIN 1 192 - -
Tpr2g4636 195 PANTHER - 1 192 - -
Tpr2g4636 195 Gene3D - 11 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4636 Tpr-Chr2 51600489 51602590 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4636 1 190 C2H2 Transcription Factor Family AT4G12240 52.000 4.71e-60 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4636 - - lja:Lj3g3v3326020.1 300.827