Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4634 ATGGTTTCAATTTCAATCCTCAAATTTCGTAGAATCTTCTACACAATAGAACCTACAACAAGCTGCAAAACATATGGTGCCTTCAGACACTGTCATTCTGGCTCTAGGGGTAGTAGCCGGAATTTTGATAATAACCCGAACTTGTCACCAAATGAGATGCTATGTAGAGTGGGGATTTTCTGGGATTTGGATAACAAGCCACCCAATTCAATTCCACCTTATCAAGTTGCTAATAAGCTGAGACTAGCTGCAGCTTCGTTCGGTGTTGTTCGGTATATGGTTGCTTATGCGAATAGCCACACGTTTAACTATGTCCCTCATGTTGTTCGGGAGATGAGGAAAGAGCGGAAAATGTTGTTTGGTTTGGAGGATAAGGGTGTTATCAAGCGTAATGAGCCTCATGTTTGTTGTGTTTGTGGGAGAAAATTTTATACTAATGAAAAGCTTGTTAATCATTTCAAGCAACTGCATCAGCGTGAGAATGCAAAAAGAGTGAATCAGATAGAGTCGGCTAGAGGGAGTAGGAAGGTGAAATTGGTGGGTAAGTATTCTATGAAAATGGAAAAGTATAAAAAGGCTGCGAGTGCTGTTTTGACTCCCAAAGTTGGGTATGGTTTGGCAGATGAGCTGAAACGGGCAGGGTTTTGGGTTCAAACTGTGTTGGATAAGCCACAAGCTGCAGATATTGCGTTGCAAAAGCATATGGTGGATATGATGGATCATAGGCGGGTTGAGTGTGTGGTTCTTGTTTCCGATGATTCTGATTTTGTTGATGTAATAAAGGAGGCAAAACTACGGTGTCTCAAGACTGTTGTTATTGGGGATATTAGTAGTGACGGGGTCTTGAAAAGGACTGCTGATACTGCCTTTTCTTGGGAGGAAATTTTGACGGGGGAGGATAAGAAGGAGGATGTATCCGTTGTGGAAAATTGGAAAGATCGTGATATATTGAAAAGGTTGGAGTGGACATACAATCATGACGTGGATAAAAAGAAACTCAACCTGGATGATGCAGTTGGTGAAACATCTGGAGATGATGATATTGAAGATATCTTCGATGATGTTGATGATGACTACAAGGATGACAAAGGTGCTTGGTGGGAATTAGACGGATGA 1116 0.4149 MVSISILKFRRIFYTIEPTTSCKTYGAFRHCHSGSRGSSRNFDNNPNLSPNEMLCRVGIFWDLDNKPPNSIPPYQVANKLRLAAASFGVVRYMVAYANSHTFNYVPHVVREMRKERKMLFGLEDKGVIKRNEPHVCCVCGRKFYTNEKLVNHFKQLHQRENAKRVNQIESARGSRKVKLVGKYSMKMEKYKKAASAVLTPKVGYGLADELKRAGFWVQTVLDKPQAADIALQKHMVDMMDHRRVECVVLVSDDSDFVDVIKEAKLRCLKTVVIGDISSDGVLKRTADTAFSWEEILTGEDKKEDVSVVENWKDRDILKRLEWTYNHDVDKKKLNLDDAVGETSGDDDIEDIFDDVDDDYKDDKGAWWELDG* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4634 371 ProSiteProfiles Zinc finger C2H2 type domain profile. 134 162 IPR013087 -
Tpr2g4634 371 ProSitePatterns Zinc finger C2H2 type domain signature. 136 157 IPR013087 -
Tpr2g4634 371 PANTHER - 29 370 - -
Tpr2g4634 371 Gene3D - 55 296 - -
Tpr2g4634 371 CDD PIN_LabA-like 144 275 - -
Tpr2g4634 371 Pfam NYN domain 207 289 IPR021139 GO:0004540
Tpr2g4634 371 PANTHER ZINC FINGER (C2H2 TYPE) FAMILY PROTEIN 29 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4634 Tpr-Chr2 51559873 51563237 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4634 10 370 C2H2 Transcription Factor Family AT4G12240 53.100 8.86e-132 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tpr2g4634 NYN 4.5e-08 CL0280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4634 - - lja:Lj3g3v3326020.1 531.561