Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4626 ATGGCTCCTCCAAAATCAAAACTCAAAACCCTAATTTCTCTCTCTAAACTCTTCCTTTCTTTCTCTCTCCTCCTCCACACCGCCATTGCCGACGATGCCGTTTTCATGAACAAGCTTTCAAAAGCCCTTACTCCAACTCCCTCAGGCTGGTCATCGTCAGCCACATTCTGCAACTGGAGCGGCGTCAAATGCGACGGTTCAAATCGCGTAATATCGATTAACTTAGCTTCTAGTTCACTCACCGGAAAATTACCTTCCGATCTGAACTCACTGTCAGAACTCACTACACTTTCTCTTCAATCCAACTCTCTCTCCGGTGAGTTACCTTCACTCGCTAATCTCTCGAATCTTCAAACGGTTTTTCTCGGAAACAACAACTTCACTTCAATCGCTAAAGGTTGCTTTGAAGGACTCACTAGTCTCCAGAAACTTTCCTTGACTCCGAACACTAACCTTGCACCGTGGACGATTCCGACTGAGTTGACTCAGTCTTCGAATCTCGTCGAACTTGACCTTGGTCAAACGAATCTCATAGGTTCGTTACCGGATATATTCGATACATTGGTTAGTTTGCAGAAACTTCGTCTTTCTTACAATAACCTCACTGGAGATTTACCTAACTCATTCTCTGGATCTGGGATTCAGAATTTGTGGCTTAATAATCAGCAAGATGATTATGGTTTTACTGGTTCTATTGATTTGCTTTCTTCGATGTCACATTTAACTCAAGTTTGGTTTCAGAAGAACAAGTTCACTGGTCCAATTCCTGATTTATCAAACTGTACTAATTTGTTTGATTTGCAGCTTCGTGATAATCAGTTAACTGGTGTTGTTCCGTCTTCTTTGATGAGTTTATCTAGCTTGACGAATGTTTCTTTGGATAATAACAAGTTGCAGGGTCCTTTTCCTTCTTTTGAGAAAGGTGTAAAGGTTACTCTTGATGGGATTAATAGCTTTTGTGGAAAAGCTCCTGGACCTTGTGATCCTAGGGTTACAACTTTGCTTGATATTGCTGCTGGTTTTGGGTATCCTCTTCCGTTGGCTAGTTCTTGGGGAGGGAATGATCCTTGTGATGATTGGAGCTTTGTTGTGTGTTCGGGATCGAAGATTATTACAATCAATTTACCAAAAAAGCATTTGAATGGGACCATTTCACCTGCATTTGGGAATTTAACTGATTTGAGGAATTTGTATTTAGGTGGTAATAATTTGTCAGGTTCGATACCGGGGAGTTTGACGGGTTTGACTCAACTTGAGGTTTTGGATGTGTCTAACAACAATCTATCTGGAGATATTCCTATGTTTTCGGGTAAAGTCAAGTTCAATTCTGCTGGTAATGTTTTGCTTGGGCATTCAGGAGGTGGTGGAGGAAGTGGAACTACTCCACCAACGGATTCTGGTGGTGCACCGAACGGAAGTCCATCGGGAAAGGCAAGTGGTTCTTCACTTTCGCCTGGTTGGATCGCAGGTATAGCTGTTATTGTTGTGTTTTTTGTTGCAGTGGTGTTGTTTGTGTTTTGCAAGTGTTATACCAAGAACCGGAGGCATGGGAAATTCGGAAGGGTTAATAATCCTGAAAATGGTAAAGGTGATGTTAAAATTGATGTCATGAGTGTTTCTAATTCTAATGGATATGGTGGAGTTGCGAGTGAGTTACAGAGTCAGGGAAGTGAGCGCAGTGACATTCAGGTTTTTGAGGGTGGAAATGTTACTATTTCTATCCAAGTTCTTAGGCAAGTAACCGGTAATTTCAGTGAAGATAACATTTTGGGTAGGGGAGGTTTCGGAGTTGTTTATAAAGGGGAATTGCATGATGGGACTAAGATTGCTGTGAAGAGGATGGAATCTGTTGCAGTGGGAACTAAGGGATTGAATGAGTTCCAAGCAGAGATTGCAGTTCTAACTAAAGTTAGGCATAGGCATTTGGTTGCTCTTTTAGGATTCTGCATAAACGGCCATGAAAGGCTTTTGGTGTATGAGTATATGCCGCAAGGAACATTAACACAACATCTGTTTGATTGGGGTGAAAATGGATGTGCTCCTTTGACTTGGAAACAGAGGGTAGCAATAGCTTTGGATGTAGCGCGGGGAGTGGAATACTTGCACAGCTTAGCTCAACAAAGTTTCATTCACAGGGACTTGAAACCCTCCAACATACTATTGGGTGATGACATGAGAGCAAAGGTTGCAGATTTTGGGTTGGTTAAAAATGCACCGGATGGCAAATATTCCGTTGAGACAAGATTGGCTGGAACATTTGGATATTTGGCACCTGAATATGCAGCCACTGGAAGAGTGACAACCAAAGTAGATGTTTACGCATTTGGAGTAGTTCTGATGGAACTGATTACTGGTAGAAGGGCATTGGACGATTCTATGCCTGACGAAAGATCGCATTTGGTTTCATGGTTCCGTAGGGTACTAGTCAACAAGGAGAACATCCCTAAGGCAATTGATCAAACACTGAACCCTGACGAAGAAACCATGGAGAGCATATATAAAATCGCTGAGCTTGCAGGCCATTGCACTGCTCGCGAACCACACCAGAGACCAGATATGGGACATGCAGTGAATGTCCTTGTTCCTCTAGTAGAGCAATGGAAGCCTAGCAACCATGAAGAAGAAGATGGTTATGGTATTGACCTTCACTTGAGCCTTCCTCAAGCTCTGCAAAGATGGCAAGCCAATGAAGGCACTTCCACAATGTTTAATGACATGTCTTTCTCACAAACCCAATCAAGTATTCCATCAAAACCTTCAGGATTTGCAAACTCCTTTGATTCAATGGATTGCCGGTAA 2799 0.4241 MAPPKSKLKTLISLSKLFLSFSLLLHTAIADDAVFMNKLSKALTPTPSGWSSSATFCNWSGVKCDGSNRVISINLASSSLTGKLPSDLNSLSELTTLSLQSNSLSGELPSLANLSNLQTVFLGNNNFTSIAKGCFEGLTSLQKLSLTPNTNLAPWTIPTELTQSSNLVELDLGQTNLIGSLPDIFDTLVSLQKLRLSYNNLTGDLPNSFSGSGIQNLWLNNQQDDYGFTGSIDLLSSMSHLTQVWFQKNKFTGPIPDLSNCTNLFDLQLRDNQLTGVVPSSLMSLSSLTNVSLDNNKLQGPFPSFEKGVKVTLDGINSFCGKAPGPCDPRVTTLLDIAAGFGYPLPLASSWGGNDPCDDWSFVVCSGSKIITINLPKKHLNGTISPAFGNLTDLRNLYLGGNNLSGSIPGSLTGLTQLEVLDVSNNNLSGDIPMFSGKVKFNSAGNVLLGHSGGGGGSGTTPPTDSGGAPNGSPSGKASGSSLSPGWIAGIAVIVVFFVAVVLFVFCKCYTKNRRHGKFGRVNNPENGKGDVKIDVMSVSNSNGYGGVASELQSQGSERSDIQVFEGGNVTISIQVLRQVTGNFSEDNILGRGGFGVVYKGELHDGTKIAVKRMESVAVGTKGLNEFQAEIAVLTKVRHRHLVALLGFCINGHERLLVYEYMPQGTLTQHLFDWGENGCAPLTWKQRVAIALDVARGVEYLHSLAQQSFIHRDLKPSNILLGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKVDVYAFGVVLMELITGRRALDDSMPDERSHLVSWFRRVLVNKENIPKAIDQTLNPDEETMESIYKIAELAGHCTAREPHQRPDMGHAVNVLVPLVEQWKPSNHEEEDGYGIDLHLSLPQALQRWQANEGTSTMFNDMSFSQTQSSIPSKPSGFANSFDSMDCR* 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4626 932 CDD STKc_IRAK 590 863 - -
Tpr2g4626 932 Pfam Protein tyrosine and serine/threonine kinase 587 858 IPR001245 GO:0004672|GO:0006468
Tpr2g4626 932 MobiDBLite consensus disorder prediction 457 477 - -
Tpr2g4626 932 Gene3D Phosphorylase Kinase; domain 1 546 661 - -
Tpr2g4626 932 ProSitePatterns Serine/Threonine protein kinases active-site signature. 709 721 IPR008271 GO:0004672|GO:0006468
Tpr2g4626 932 PANTHER OSJNBA0070M12.3 PROTEIN 19 932 - -
Tpr2g4626 932 SMART serkin_6 584 864 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g4626 932 Pfam Leucine Rich Repeat 190 210 IPR001611 GO:0005515
Tpr2g4626 932 Gene3D Ribonuclease Inhibitor 329 452 IPR032675 -
Tpr2g4626 932 MobiDBLite consensus disorder prediction 455 477 - -
Tpr2g4626 932 SMART LRR_typ_2 391 414 IPR003591 -
Tpr2g4626 932 SMART LRR_typ_2 415 437 IPR003591 -
Tpr2g4626 932 SMART LRR_typ_2 188 211 IPR003591 -
Tpr2g4626 932 SMART LRR_typ_2 114 137 IPR003591 -
Tpr2g4626 932 SUPERFAMILY L domain-like 351 435 - -
Tpr2g4626 932 Pfam Leucine rich repeat N-terminal domain 332 366 IPR013210 -
Tpr2g4626 932 Pfam Leucine rich repeat N-terminal domain 31 65 IPR013210 -
Tpr2g4626 932 PANTHER RECEPTOR PROTEIN KINASE TMK1-RELATED 19 932 - -
Tpr2g4626 932 SUPERFAMILY L domain-like 35 305 - -
Tpr2g4626 932 Pfam Leucine rich repeat 374 428 IPR001611 GO:0005515
Tpr2g4626 932 Pfam Leucine rich repeat 112 149 IPR001611 GO:0005515
Tpr2g4626 932 ProSiteProfiles Leucine-rich repeat profile. 93 115 IPR001611 GO:0005515
Tpr2g4626 932 ProSiteProfiles Protein kinase domain profile. 584 864 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g4626 932 Gene3D Transferase(Phosphotransferase) domain 1 662 883 - -
Tpr2g4626 932 SUPERFAMILY Protein kinase-like (PK-like) 561 860 IPR011009 -
Tpr2g4626 932 ProSitePatterns Protein kinases ATP-binding region signature. 590 612 IPR017441 GO:0005524
Tpr2g4626 932 Gene3D Ribonuclease Inhibitor 31 322 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4626 Tpr-Chr2 51466071 51470397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4626 70 860 Receptor kinase-like Gene Family AT5G07280 33.210 3.44e-97 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Tpr2g4626 PK_Tyr_Ser-Thr 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4626 - - gmx:100781851 1432.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4626 2 51466071 51470397 Tpr2g4626 2 51466071 51470397 ECH