Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4612 ATGACAAATAATTTATTTTTGTTTGTCTCATTTTGGTTTATCATGGAGAGTTCGACGACGGGGTCAGGTGGCGGTGGTAATCCAGCACCGTTCCTAGTGAAAACATATGAGATGGTTGATGATTCGTGTACAGATGAGATAGTATCATGGAGTGAAAACAACAACAGTTTCATCGTTTGGAATCCAACTGAATTTGCTCGTCTTCTTCTTCGTAATTATTTCAAACACAATAATTTCTCTAGCTTCATTCGTCAGCTTAATACTTATGGATTTCGAAAAATACATCATGAGCAATGGGAGTTTGCTAATGAATATTTTGTGAAAGATCAAAAGCATCTTCTTAACAACATTCACCGTAAGAAACCAATTCACAGTCACAATAATTCACAAGGCTCTCATGTAGATCCAGAAAGGTTAGCATTTGAGGAAGAAATAGAGAAACTTTCGAACGAGAAAACTACTATTCAATCCAATATTTCAAACTTCAAGCAAAATATATCAACCGCAAAGCTTCATCTGGAAGATCTGCAACAACGATTAGACGGCATGGAGAAGAGGCAAAAAAACTTGTTGAACTTGTTTGAAAGGGAACTTCAAAATCCTAAATTTGTTGAACAAATTTATCAGAAAATTGAGTCCTTAAATTTATCAGGACACAACAAGAAAAGGCGATTTCCTCATGTTGTTGAAAATAGTTTTGTTGACAATGATAGCAATTTTGGAATAACGGAAGTTGGAAATATGAATTTTTTCCGTGAAGATTTCTGCAGTAAACTCAACTTGTTATCAACTACTAGTTCAAATGAAGATGGTGAAAGCACACATAATAAGATGTTGTGCGAAGGAGAATTACCGAAAGAAACTCTTGGATTTGTATCTGGAAAAGAATGTCATTTGCTCTCATGCTCTCCTTCGGTCAATCTTATCTCAGATCATGCCGATAATGGAGCATGCTTCACTTTTGATATGGATTCATGCTTATTACAAGGTGGAAAATTGAACTCCTCGGAACCAAAGAACGGAGAAAGTGATTGTGATCAAATATGCTGTCTTTTAAGTCTAACTATGGCATCTTCTCCGGCACAAGATATATCACCACAAATAGACTGTCAAGAAATCGGTAAATCAATTGAATCAAGATTTCATACCAATGATCATATTGGAGCTTTTTCAAACAGGAATTTGGATAATGTGGTTACAAGTTTAGCCTCCTCGATAGTCTCTCCTAGTAACGACCAAGGGATCCCAGCTGCTCCGGTTAAAGACAGAGTGAATGATCTGTTTTGGTCACAGTACCTTACAGAATGA 1308 0.3631 MTNNLFLFVSFWFIMESSTTGSGGGGNPAPFLVKTYEMVDDSCTDEIVSWSENNNSFIVWNPTEFARLLLRNYFKHNNFSSFIRQLNTYGFRKIHHEQWEFANEYFVKDQKHLLNNIHRKKPIHSHNNSQGSHVDPERLAFEEEIEKLSNEKTTIQSNISNFKQNISTAKLHLEDLQQRLDGMEKRQKNLLNLFERELQNPKFVEQIYQKIESLNLSGHNKKRRFPHVVENSFVDNDSNFGITEVGNMNFFREDFCSKLNLLSTTSSNEDGESTHNKMLCEGELPKETLGFVSGKECHLLSCSPSVNLISDHADNGACFTFDMDSCLLQGGKLNSSEPKNGESDCDQICCLLSLTMASSPAQDISPQIDCQEIGKSIESRFHTNDHIGAFSNRNLDNVVTSLASSIVSPSNDQGIPAAPVKDRVNDLFWSQYLTE* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4612 435 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-5 23 435 - -
Tpr2g4612 435 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 23 435 IPR027725 -
Tpr2g4612 435 Gene3D - 25 121 IPR036388 -
Tpr2g4612 435 SUPERFAMILY "Winged helix" DNA-binding domain 27 120 IPR036390 -
Tpr2g4612 435 Pfam HSF-type DNA-binding 31 120 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tpr2g4612 435 ProSitePatterns HSF-type DNA-binding domain signature. 70 94 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tpr2g4612 435 Coils Coil 138 193 - -
Tpr2g4612 435 SMART hsfneu3 27 120 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tpr2g4612 435 PRINTS Heat shock factor (HSF) domain signature 31 54 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tpr2g4612 435 PRINTS Heat shock factor (HSF) domain signature 69 81 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tpr2g4612 435 PRINTS Heat shock factor (HSF) domain signature 82 94 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4612 Tpr-Chr2 51168254 51170948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4612 31 435 HSF AT4G13980 42.488 2.26e-96 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Tpr2g4612 HSF_DNA-bind 2.8e-30 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4612 K09419 - gmx:100786408 419.853