Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4600 ATGATAATGTTACCTTTTTGCTCAGCCACACCGTGTTATTCCCCTTCTTCTCAGATTCCTTTATTTGGGGGATTTCAATCTCTTTGTCCAGTTCGAAAGGATTTTGAGAGTAAATGTGTTGCAGAAGAAACTGTACATTTAGGTTTGCATTATGGAACACCTTCACTTAGAAATTCATTTGCAACACAAGCTATAAAGAATGTTTCAGCATGGGAAAATTCAGATTGGCATCATTCACTAAGTAATGGAGAATTTAGATATAGTTTATCGACCGTGCCGGAGGAATTAGTAGACTTTGCAGGACAGTCAACTGAAGGATCTGATGCATTAGTAGCACCTGCACAACCAGAAGCAATATCGAGTACCGATATATCGTCGGGGAAGTTTGAATCTGTGTCTAGTTTGATTCAAGGGGGTAATGAATCGTTAGCTGCTACAAAAGAAAGTGTTGGTGACCTTGTTTCTGGAGTAAATGAGTCATTCAATGCAGCTGTTAATAAGGGAGAAGATATTTTACGAAGCTCGCTGGATACGGCCAGTTCTTTTGTTGATTCCATTGTTAAAAATGCTACTACATCTGCAGATAATGCTTTTAGTAAGGTGTTTTCTTCTGTTGATCAAACGGGGGATTTAGCGAATAAGAAAATTACTAGCGTTTCTAGCGGGATAAATGGAGTCACGAGTAAGGCACCTGGTTTGGTTATTGATGTGTTGCGCCGCACAGTTGTTGTGGTAGAGAGTTCTTTATCAAAGGGGGCTTCCTATGTTGTTTACTTGTATGGATCAGCCAAGGAGGTTCTTCCTGCAGAGATTAGGGGTTCAGTCAATGTATATGAAGAAAAAGCAACACAAATCTTAAGGCCTGTTGGGTCTGCAACTCAACAGATATACACGGCTTTCTATTCATTGGAGAAGAGTCTTGGCTTGGATCCAAACGACCCGATTATTCCATTTGTTGTTTTTGTCGGCTCTTCAGCAACATTGTGGGCTATTTATTGGTTGTGGAAATATGGAGGTTACTCAGGAGATTTATCACCTAAATCAGCTTTTGAGCTCTTGTCTGGGGACTCAAATGCTGTACTTATAGATGTCCGCTCTGAGGATTTGCGAGAAAAAGATGGTATTCCTGATATTCGACGGGGTGCTCGGTTTCGCTATGCAAGTGTAACTCCAATCGAGGTTGATGGCTCCATACGCAAGTTGTTGAAGGGTGGTAGAGACCTGGATGACTTTTTGGTTGCTGTTGTTATTCACAATTTGAAAATTGTTAAGGACAGTTCCAAGGTTATTGTGTTGGATGCTGATGGTACTCGTTCTAAAGGCATTGCAAGGTCCTTGAAGAAAATTGGAATCAAGAATCCATACTTGGTCCAAGGTGGCTTTCAGTCTTGGTCTAAACAAAGTCTCCGCATCAAGGAACTCAAACCTGAAACAACATTTACCATACTTAATGAGGAAGCTGAAGCAATTCTAGAGAATATTAGACCTTCTCCTTGGCAAATTTTAGGTTATGGTACGGCACTACTTGCAGGGTCATATGGATTAGTAGAGTGGGAGAAAACATTGCAGTTTATCGGTGTTTTTGGCCTCAGTTTGACCTTATATCTGCGGTTTTCTTCATATGAAAGGTCAGAAGATTTGACGCAAGATGTGAGGCTATTGCTTGCTCCTGTTAAACTTGGAGGTCAGGCGTTTTCATGGGCTGCCGGAAAATTGGAATCAAATGGCATAGGGTTACCTACATCACCTTCATCTTTAGATGTTCAGAACCGGGTGTTACAGGCCGCTGCTAAACATGAATCCCAACCATCTGATAGTGAAGGTAACCAAGACCCAAATCCTGAATCCACAGTTACTCTCAATCAAAATGCATGA 1875 0.4117 MIMLPFCSATPCYSPSSQIPLFGGFQSLCPVRKDFESKCVAEETVHLGLHYGTPSLRNSFATQAIKNVSAWENSDWHHSLSNGEFRYSLSTVPEELVDFAGQSTEGSDALVAPAQPEAISSTDISSGKFESVSSLIQGGNESLAATKESVGDLVSGVNESFNAAVNKGEDILRSSLDTASSFVDSIVKNATTSADNAFSKVFSSVDQTGDLANKKITSVSSGINGVTSKAPGLVIDVLRRTVVVVESSLSKGASYVVYLYGSAKEVLPAEIRGSVNVYEEKATQILRPVGSATQQIYTAFYSLEKSLGLDPNDPIIPFVVFVGSSATLWAIYWLWKYGGYSGDLSPKSAFELLSGDSNAVLIDVRSEDLREKDGIPDIRRGARFRYASVTPIEVDGSIRKLLKGGRDLDDFLVAVVIHNLKIVKDSSKVIVLDADGTRSKGIARSLKKIGIKNPYLVQGGFQSWSKQSLRIKELKPETTFTILNEEAEAILENIRPSPWQILGYGTALLAGSYGLVEWEKTLQFIGVFGLSLTLYLRFSSYERSEDLTQDVRLLLAPVKLGGQAFSWAAGKLESNGIGLPTSPSSLDVQNRVLQAAAKHESQPSDSEGNQDPNPESTVTLNQNA* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4600 624 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 328 471 IPR036873 -
Tpr2g4600 624 MobiDBLite consensus disorder prediction 594 624 - -
Tpr2g4600 624 ProSiteProfiles Rhodanese domain profile. 355 473 IPR001763 -
Tpr2g4600 624 Gene3D - 340 481 IPR036873 -
Tpr2g4600 624 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 3 623 - -
Tpr2g4600 624 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 3 623 IPR044690 GO:0009704|GO:0071277|GO:0090333
Tpr2g4600 624 Pfam Rhodanese-like domain 353 466 IPR001763 -
Tpr2g4600 624 SMART rhod_4 345 470 IPR001763 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4600 317 434 Sulfurtransferasese or Rhodanese AT5G23060 28.571 9.92e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4600 - - mtr:MTR_3g084030 1020.38