Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4567 ATGGGAGAAATACATAGTGAGGTAACATGGGAGAAGGAGGAGGAAGAAAAAGAAGAAGAAGAACAAGCTCAAGTTGATATATGGAAATACATATTTGGTTTTGTAGAACTTTCAGTGGTGAAATGTGCAATTGAACTTGGCATAGCTGATGCCATTGAAAAACACAAAAAACCCATGTCACTAATAGAGTTATCAACCACTCTAAAATGTGACCCTTCATATCTTAACCGCATCATGAGATTCCTGGTACATAGAAAAATATTCAAAACCATATATACCAGCCATGATACCTATCCTAGTTATGTCCAAACACCACTTTCTCGCCGTTTGATTAAAAACGGCGAGAAAAGCATGACTGCTCTTCTTTTACTGGAGAGTAGTCCTGTAATGGTAGCACCTTGGCTTAGTTTAAGCGGTCGTGTTTTGGTTAATGGAAATCCTTCTTTTGAGAAGGTTCATGGTGAAGATGTGTGGCGTTATGCTGCTTCAAATCTTGATCATAGTAATCTTATTAATGATGCTATGGCTTGTGATGCTAAAGTTGTTGTGCCAGCAATTGTTGAAGGTTGTGGTGAGATTTTTGATGGTGTTGAATCCTTGGTGGATGTTGGTGGAGGGAATGGAACCACCATGAGTATTCTTGCTAAGGCTTTTCCTTGGATTCATGGAATTAACTTTGATCTTCCCCATGTCATTGATGTGGCTCCAAAGTGTGATGGGGTGGAACATGTGGCAGGTGACATGTTTATGAGTGTTCCCAAAGCTGATGCCGTAATTATTAAGTGGGTTTTACATGATTGGGGTGATGATGAGTGCATCCAAATCTTGAAGAAATGTAGGGAAGCTATTCCAAAAGAAAAAGGAAAAGTTATTATTGTGGAAGCACTTATTGAAGAAGAAGGAGGAAAACACAACAACTACAAAGATGTAGGGTTAATGTTAGATATGGTTATGATGGCACATACTAATATTGGGAAAGAAAGGACACTTAAAGAATGGGACTATGTTATCAAAATGGCTGGATTCAAGGAATTCACTGTGAAATATATTAATGCTGTACAATGTGTAATTTTAGCCTCATGCTAA 1086 0.3812 MGEIHSEVTWEKEEEEKEEEEQAQVDIWKYIFGFVELSVVKCAIELGIADAIEKHKKPMSLIELSTTLKCDPSYLNRIMRFLVHRKIFKTIYTSHDTYPSYVQTPLSRRLIKNGEKSMTALLLLESSPVMVAPWLSLSGRVLVNGNPSFEKVHGEDVWRYAASNLDHSNLINDAMACDAKVVVPAIVEGCGEIFDGVESLVDVGGGNGTTMSILAKAFPWIHGINFDLPHVIDVAPKCDGVEHVAGDMFMSVPKADAVIIKWVLHDWGDDECIQILKKCREAIPKEKGKVIIVEALIEEEGGKHNNYKDVGLMLDMVMMAHTNIGKERTLKEWDYVIKMAGFKEFTVKYINAVQCVILASC* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4567 361 PANTHER O-METHYLTRANSFERASE 13 358 IPR016461 GO:0008168
Tpr2g4567 361 PANTHER 3'-HYDROXY-N-METHYL-(S)-COCLAURINE 4'-O-METHYLTRANSFERASE 2-LIKE 13 358 - -
Tpr2g4567 361 Gene3D Vaccinia Virus protein VP39 112 359 IPR029063 -
Tpr2g4567 361 CDD AdoMet_MTases 200 293 - -
Tpr2g4567 361 Pfam Dimerisation domain 39 83 IPR012967 GO:0046983
Tpr2g4567 361 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 28 361 IPR016461 GO:0008168
Tpr2g4567 361 Pfam O-methyltransferase domain 134 343 IPR001077 GO:0008171
Tpr2g4567 361 SUPERFAMILY "Winged helix" DNA-binding domain 17 114 IPR036390 -
Tpr2g4567 361 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 357 IPR029063 -
Tpr2g4567 361 PIRSF O-mtase 5 361 IPR016461 GO:0008168
Tpr2g4567 361 Gene3D - 9 110 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4567 Tpr-Chr2 50513561 50516375 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4567 39 347 Monolignol Biosynthesis Gene Families AT5G54160 36.278 6.33e-62 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4567 K22588 - gmx:100782951 487.648