Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4535 ATGGATTTGACATCAACTTCATCTGGAATTGCCCAAATGCCTGTTGTTGATAGTTCAGACACACTTGCTGATAGTTTGCAATGCTACTATCCTACTAAAAAAGAAACTTGGGAGTCTCTTGCTTTTAAATCGGTTGAAGAGGTTGAAAAATTTTATGGTGATTATGCACTTAAAAGTGGGTTTTCAATTCGGATTTTGTTGAAATCAAGAAACAATTCACAGAATCAGCCAACTGATAAAATACACTATCTACGATATGGATGTAACAAACAAGGTTACAAGAAAGGAAGTTTGCTTGATCCGAAGAACAAGCCAAAATCAGAGAGTCCGGTTGTGGTTGAATTTGAGAAAGTAAAAGAAAAACCTGAGGAAAGGGTTGGTTGTACAGCTGCCATATTTTTGAAGTTGGATGAAACTCTGAATGTCTTTAAGATATACAAATGGGATGTGCCCCATTGTCATCCGTTACATAAACCGAAACATGGATGTTACTTGAGATCATTCAGACGAGTCAATGAAGTGCAAGGACAGCTTGCTGTAATAAATTCGAAAGCCGGGATGTCGATGAGAACTTCTTATGAAGTCATGGGTCAGGGAGTTGGAGGAACAGATAACTTGCCTTTTCGATTTTCGGATTTAAAGAATTATCTGATGACAAATCGGCAAAAAGAGATGCTAGTTGGTGAGGCAACCGTGATTCAAGATTTTTTTAGAAATGAAGCTCTGTCGAAACCATCCTTTTATTATGATATTCAAGTTGATGCTGCGGAAGATATAGCTAGTATTTTTTGGGCAGATGGGATTATGCAGCATGATTATGCCTTATTTGGTGATGTT 837 0.3751 MDLTSTSSGIAQMPVVDSSDTLADSLQCYYPTKKETWESLAFKSVEEVEKFYGDYALKSGFSIRILLKSRNNSQNQPTDKIHYLRYGCNKQGYKKGSLLDPKNKPKSESPVVVEFEKVKEKPEERVGCTAAIFLKLDETLNVFKIYKWDVPHCHPLHKPKHGCYLRSFRRVNEVQGQLAVINSKAGMSMRTSYEVMGQGVGGTDNLPFRFSDLKNYLMTNRQKEMLVGEATVIQDFFRNEALSKPSFYYDIQVDAAEDIASIFWADGIMQHDYALFGDV 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4535 279 PANTHER OS03G0181600 PROTEIN 40 279 - -
Tpr2g4535 279 Pfam FAR1 DNA-binding domain 50 157 IPR004330 -
Tpr2g4535 279 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 40 279 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4535 Tpr-Chr2 50122227 50123063 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr2g4535 FAR1 1.1e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4535 - - mtr:MTR_0558s0020 433.335