Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4511 ATGGAGTGCAATAAGGACGAGGCTACCAGAGCTAAAGAAATTGCTGAGAGGAAGTTCATTGCAAAGGACATATCGGGAGCAAAGAAGTTTGCTTTGAAAGCCCAAAATTTATATCCTTCCCTTGAGGGTATTCCTCAACTGATAGCAAAAATTGACGTGTATATTTCTGCTGAGAATAAAGTAAAAGGAGAAGCAGATTTGTATGGTATACTTGGTGTGGACCCGCGTGCCGACGATGATACGGTCAGGAAACATTATAGGAAGCTAGCTCTCATGCTTCACCCAGACAAGAACAAGTCTGTCGGAGCCGATTGGGCCTTTAAACATGTTTCAGAGGCGTGGAGTATACTGTCCGATAAGGCAAGAAGGGCAGCTTATGATGAAAAGATAAATGCAAAAGCACAGAAAGGCTCAACCATTTTTGGCGGTTCATCAGCAAACGCGGTGGCAAATGGGGCTAAAGAACAAAGTTCATGTTCTATCCATAAATCCAAATCCACATTTTGGACTACTTGCATTGGATGTAAAATGCAATACGAGTATCCAAGAATGTACATAAACCTGAAACTCGCGTGCCCTAACTGCCATGAAATATTTTTGGCACTAAAAACCAATACGCCTCCTGCTAGTTGTATCAGACCTGGGGCTCCGTTGAATTTTAATCCAAAGCCCGATCACCAAGGACCTCATAAAAGCAAATCTAATGCTGGAAAGAACAACATGGCAGCTCCAAATGTTGGAGCAGGGTCTAACAAGAATAGTTTCCAGTGGGCTCCATTCTCAAACTCTGGCATTTCTAATGTGGCTCAAGCTGCAAATGTGGTTCAGCAGGCATATCATAAGGTGAAGCGAGATCGTGAGGAGGCACAAGCCACTACTGAAAAGGAAGAGGCTTTAAGAAGGAAGCAGAATGTTTCCAAAAAAGGTTACGGTAAAGGTAATCGAGCTAAGAGGAAAAGAAGGGGCATGGAGGGAAATGGAGCATCTAACTCTACTAGAGATCTCTCCGCCATTGAACTTCAGAATCTTCTTATCGAGAAAGCAAGAAAAGAAATTAGGAAGCAACTCAACGAGTTTCAGTCAAATACTGTCGATAAATCAGTGGCGTAA 1110 0.4279 MECNKDEATRAKEIAERKFIAKDISGAKKFALKAQNLYPSLEGIPQLIAKIDVYISAENKVKGEADLYGILGVDPRADDDTVRKHYRKLALMLHPDKNKSVGADWAFKHVSEAWSILSDKARRAAYDEKINAKAQKGSTIFGGSSANAVANGAKEQSSCSIHKSKSTFWTTCIGCKMQYEYPRMYINLKLACPNCHEIFLALKTNTPPASCIRPGAPLNFNPKPDHQGPHKSKSNAGKNNMAAPNVGAGSNKNSFQWAPFSNSGISNVAQAANVVQQAYHKVKRDREEAQATTEKEEALRRKQNVSKKGYGKGNRAKRKRRGMEGNGASNSTRDLSAIELQNLLIEKARKEIRKQLNEFQSNTVDKSVA* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4511 369 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Tpr2g4511 369 Coils Coil 338 358 - -
Tpr2g4511 369 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN-RELATED 1 366 - -
Tpr2g4511 369 Coils Coil 282 308 - -
Tpr2g4511 369 Pfam DnaJ domain 66 127 IPR001623 -
Tpr2g4511 369 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Tpr2g4511 369 CDD DnaJ 66 119 IPR001623 -
Tpr2g4511 369 MobiDBLite consensus disorder prediction 285 304 - -
Tpr2g4511 369 MobiDBLite consensus disorder prediction 285 336 - -
Tpr2g4511 369 MobiDBLite consensus disorder prediction 305 319 - -
Tpr2g4511 369 PRINTS DnaJ domain signature 68 86 IPR001623 -
Tpr2g4511 369 PRINTS DnaJ domain signature 86 101 IPR001623 -
Tpr2g4511 369 PRINTS DnaJ domain signature 102 122 IPR001623 -
Tpr2g4511 369 SUPERFAMILY Chaperone J-domain 60 130 IPR036869 -
Tpr2g4511 369 PANTHER BNAC03G44070D PROTEIN 1 366 - -
Tpr2g4511 369 Gene3D DnaJ domain 63 173 IPR036869 -
Tpr2g4511 369 SMART dnaj_3 65 122 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4511 Tpr-Chr2 49782221 49793453 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4511 4 215 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 35.321 3.59e-37 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4511 - - lja:Lj2g3v0520120.1 456.062