Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4510 ATGGAGTGCAATAAGGACGAGGCTACCAGAGCTAAAGAAATTGCTGAGAGGAAGTTCATTGCAAAGGACATGTCGGGAGCAAAGAAGTTTGCTTTGAAAGCCCAAAATTTATTTCCTTCCCTTGAGGGTATTCCTCAAATGGTAGCGACACTTGATGTGTATATTTCTGCTGAGAATAAAGTAAAAGGAGAAGAAGATTGGTATGGTATACTTGGTGTGAACCCGCGTGCCGACGATGATACGGTTAGGAAACATTATAGGAAGCTAGCTCTCATGCTTCACCCAGACAAGAACAAGTCCATCGGAGCCGATGGGGCTTTTAAATTTATTTCAGAGGCATGGAGTATACTATCCGATAAGGCTAGAAGGGCAGCTTATGATGAAAAGATAAATGCAAAAGCACAGAAAGGTTCCACCATTTTTGGCAGTTCATCAGCAAAAGCGGCGGCAAATGGGGCTAACAATAGTAAAAAGAAACCCCCTTCAAGTGCAAAGACTCAAAAAAATACTGCTAAAGAACAAACTTCATCCTCTGCCAATAAATCAAAATCCACATTTTGGACTACTTGCCATCGCTGTAAAATGCAATACGAGTATCTCAGAATGTATCTTAACCTTAAGCTCGTGTGTCCTAGCTGCCATGAAGCATTTTTGGCTTTAGAAACTAATCCGCCTCCTGCAAGTGGTATCAGACCTGGGGCTACATTGAATTTTAAGCAAAAGCCCAATCACCAAGGACCTCATAAAAGCAAATCTAATGCTGGAAAGAACAACATGGCAGCTCCAAATGTTGGAGCAGGGTCTAACAAGAATAGTTTCCAGTGGGCTCCATTCTCAAATTCTGGCGTTTCTAATGTGGCTCATGCTGCAAATGTGGTTCAGCAGGCATATCATAAGGTGAAGCGAGATCGTGAGGAGGCACAAGCCGCTACCAAAAAGGAAGAGGCTTTAAGAAAGAAACAGAATGTTTCCAAAAAAGGTTACTTTAATCCAGCTAAGAGGAAAAGGGGGGCCATGGAGGGAAATGGAGCATCTAACTTGGGCGGTGGTATCAAGAAGTTTAACTCTACTCGAGATCTCTCCCCGGTTGAACTTCAGAATCTTCTTGTCGAGAAAGCTACAAAAGAAATTAGCAAGAAACTCAAAGAGTTTCAGTCAAATACTGTTGATAAATCAGTGGCGAAAAAGAGTGGAGATTGCTTCCAGAAAGAACGGAAAGGAGAATTTTCAGCAAGAAACTCTGAGATCTGTACTCAAAATACCATTGGCAAGTCAGAAGATGCAAAGAATAGATTGCAGGCTTGCACGTCATTTGCAGCTCCTACCATTGATAGTAATTGCACGGAAATTTTGGATTCAATGCTAGTAGATGTTCCAGATCCTGATTTTCATGATTTTTTCACGGATCGAACTGAAAGGTCTTTTGGTGAAAATCAAGTATGGACTGCATATGACGGTGATGATGGGATGCCTCGACGTTATGCTATGATTCACAAAGTGATCTCTCTGAATCCATTCAAGTTGCAGATCAGTTGGCTCTACCCAAATATCAACAGCAGCGAACCAGGCCACCAAAATTGGATTGCGTTAGGCTTTTCAAAAACTTGTGGGGATTTCAGAATAGGTAAACGCGAAATCTATGACTCGATCAATTATTTTTCTCAAAAGGTTAGGTGGATAAAAGGTAACGATCGAGCCATTTGTATATATCCCAAAAAAGGAGAGGTTTGGGCCATCTATAGGAATTGGTCTCCTAACTGGAATGAGCTAATAGCAGAGGATGTGATACACAAGTTTGATATGGTTGAAGTACTTGAGGATTTTGTTGAAGAACACGGCGTAACTGTCATTCCTTTGGTCAAGGTGGCAGGGTTCATGACAGTATTTCACCACCACTTTGATGACAAAGAGATCAAAATCATTCCGAGGAAGGAGATGCTTCGATTCTCTCATCAGGTACCTTCATACGTACTTACTGGCGAAGAAGCTGCTAATGCTCCAAAAGGTTGCAGGGTGCTGGACCCAGCTGCTACTCCATTTGAACTTCTCGAGGTAATAAAAGTCGCGCAGGAGGAAAACATAGTCGACACCATGGATAGTATCACCAAAGAAGCTCATTGTGAGGAAGTGGTCAGTGATATCGGACAACTTGGGGGAGCAAAGGAGGGATTGAAGGAAGTTACTCATAAAATGGAAACTTCAGAAGAGGACAGAGGGAAGAAGATATGCATAGGCTTGTAG 2241 0.4217 MECNKDEATRAKEIAERKFIAKDMSGAKKFALKAQNLFPSLEGIPQMVATLDVYISAENKVKGEEDWYGILGVNPRADDDTVRKHYRKLALMLHPDKNKSIGADGAFKFISEAWSILSDKARRAAYDEKINAKAQKGSTIFGSSSAKAAANGANNSKKKPPSSAKTQKNTAKEQTSSSANKSKSTFWTTCHRCKMQYEYLRMYLNLKLVCPSCHEAFLALETNPPPASGIRPGATLNFKQKPNHQGPHKSKSNAGKNNMAAPNVGAGSNKNSFQWAPFSNSGVSNVAHAANVVQQAYHKVKRDREEAQAATKKEEALRKKQNVSKKGYFNPAKRKRGAMEGNGASNLGGGIKKFNSTRDLSPVELQNLLVEKATKEISKKLKEFQSNTVDKSVAKKSGDCFQKERKGEFSARNSEICTQNTIGKSEDAKNRLQACTSFAAPTIDSNCTEILDSMLVDVPDPDFHDFFTDRTERSFGENQVWTAYDGDDGMPRRYAMIHKVISLNPFKLQISWLYPNINSSEPGHQNWIALGFSKTCGDFRIGKREIYDSINYFSQKVRWIKGNDRAICIYPKKGEVWAIYRNWSPNWNELIAEDVIHKFDMVEVLEDFVEEHGVTVIPLVKVAGFMTVFHHHFDDKEIKIIPRKEMLRFSHQVPSYVLTGEEAANAPKGCRVLDPAATPFELLEVIKVAQEENIVDTMDSITKEAHCEEVVSDIGQLGGAKEGLKEVTHKMETSEEDRGKKICIGL* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4510 746 SMART dnaj_3 65 122 IPR001623 -
Tpr2g4510 746 SUPERFAMILY Chaperone J-domain 59 126 IPR036869 -
Tpr2g4510 746 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Tpr2g4510 746 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Tpr2g4510 746 PANTHER BNAC03G44070D PROTEIN 1 684 - -
Tpr2g4510 746 MobiDBLite consensus disorder prediction 149 181 - -
Tpr2g4510 746 PRINTS DnaJ domain signature 68 86 IPR001623 -
Tpr2g4510 746 PRINTS DnaJ domain signature 86 101 IPR001623 -
Tpr2g4510 746 PRINTS DnaJ domain signature 102 122 IPR001623 -
Tpr2g4510 746 PANTHER BNAA04G14940D PROTEIN 1 684 - -
Tpr2g4510 746 CDD DnaJ 66 119 IPR001623 -
Tpr2g4510 746 Gene3D DnaJ domain 63 187 IPR036869 -
Tpr2g4510 746 Pfam Domain of unknown function (DUF3444) 455 662 IPR024593 -
Tpr2g4510 746 Pfam DnaJ domain 66 127 IPR001623 -
Tpr2g4510 746 Coils Coil 300 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4510 Tpr-Chr2 49770749 49776305 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4510 4 337 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.195 9.87e-37 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4510 - - lja:Lj2g3v0520120.1 964.911