Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4504 ATGGCTTCCATTGCTGCTTCAACTGCAGCTGCTTCACTTGGAATGTCAGAAATGCTTGGAAGTCCAATTAAATTCAGTGGTGTAATAAGGTCTGTTCCTTCTTCTTCAACTTCTTCTACTTTCAAAACTGTTGCTCTTTTCTCTAAGAAGAAACCAGCACCAGCACCAAAGAAAGCTGCAGTTACTCCGGCTAGCGAGGAACTCGCCAAGTGGTATGGTCCAGACAGAAGGATCTTCTTGCCAGACGGTCTCTTGGACAGGTCTGAGATCCCTGAGTACTTGACTGGAGAAGTCCCTGGAGACTATGGTTATGACCCTTTTGGTCTAAGCAAGAAGCCCGAAGACTTCGCCAAATATCAAGGATATGAGTTGATTCATGCTAGATGGGCAATGCTTGGTGCTGCCGGATTCATCATTCCTGAGGCCTTCAACAAATATGGAGCCAATTGTGGTCCCGAGGCTGTTTGGTTCAAGACAGGAGCTCTACTTCTCGATGGGGGTACGTTGAACTACTTCGGAAAAAGCATCCCCATCAATCTTGTTGTTGCTGTCATTGCTGAGGTTGTTCTTTTGGGAGGTGCAGAGTACTACAGAATTACCAATGGACTGGACTTGGAAGACAAGCTTCACCCCGGTGGTCCATTTGATCCATTAGGTCTAGCAAATGATCCAGACCAAGCTGCAATTCTAAAAGTGAAGGAAATCAAGAATGGTAGACTTGCTATGTTTGCCATGCTTGGTTTCTTCATTCAAGCTTATGTCACTGGTGAAGGTCCTGTTGAGAATTTTGCAAAACATCTCAGTGACCCTTTTGGCAACAACTTGCTCACTGTTATTGCTGGAAATGTTGAAAGGGCTCCAACTCTGTGA 870 0.4529 MASIAASTAAASLGMSEMLGSPIKFSGVIRSVPSSSTSSTFKTVALFSKKKPAPAPKKAAVTPASEELAKWYGPDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFAKYQGYELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKSIPINLVVAVIAEVVLLGGAEYYRITNGLDLEDKLHPGGPFDPLGLANDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENFAKHLSDPFGNNLLTVIAGNVERAPTL* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4504 289 Pfam Chlorophyll A-B binding protein 91 252 IPR022796 -
Tpr2g4504 289 Gene3D Chlorophyll a/b binding protein domain 78 289 - -
Tpr2g4504 289 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 289 IPR001344 GO:0009765|GO:0016020
Tpr2g4504 289 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 289 - -
Tpr2g4504 289 SUPERFAMILY Chlorophyll a-b binding protein 71 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4504 Tpr-Chr2 49626461 49630623 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4504 11 289 Chloroplast and Mitochondria Gene Families AT4G10340 85.357 8.17e-156 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4504 K08916 - twl:120006908 489.189