Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4502 ATGGGTTGTTCAGTATTTAGTTTTCTTATCTTTTCTCTAATGGTTTTTGTTTTAAGCCCAAAAGGTGTTTGTGGAAATGCTGAGCTGAAAGCACTTTTGGATTTAAAAGCTAGTTTAGATCCAGAAGGAATTTTTTTGTCTTCATGGACAAAGAATGGTAACCCTTGTGATGATTCATTTGAAGGTGTAGCTTGTAATGAAAAGGGTCAAGTAGCAAATGTTTCATTGCAAGGAAAAGGACTTTCTGGTAAATTATCACCAGCTATTGGTGATTTGAAGCATTTGACAGGACTTTACTTGCATTACAACTCTTTGTATGGTGATATACCAAGAGAAGTTGCTAATCTGACTCAGCTTAGTGATTTGTATTTGAATGTGAATCATTTTTCTGGTGAAATCCCATCTCAGATTGGTAAAATGGAGAATCTTCAAGTTTTGCAGCTTTGTTATAACCAGTTAACAGGAAGCATACCTACTCAGCTTGGTGATTTGAAAAAGCTTAGTGTTCTTGCTCTACAGTCAAACAAGTTAGCTGGAGCTATTCCTGCTAGTTTAGGTGACTTAGGAATGTTGATGAGACTAGATTTGAGCTCGAATAATCTTTTCGGTTCAATTCCAACTAAACTAGCTGAAGCTCCTTTTCTTCAAGTTCTTGATGTTCACAACAATACTCTTTCTGGAAATGTACCTCCTGCTCTGAAGAGACTAGATGACAAATTTGTGTATGAATACAATTTGGGACTATGCGGAGATGGATTTTCATCCTTGAAAGCTTGCAATGCATCAGATCATGCCAATCCCAACAGGCCTGAACCATATGGAGCAAGAGTTGGTGGTATTCCAAAGGAAATCCCAGAAACCGCAGATATAAAGTTGCCTTGCAATACAACTCGGTGCCAAAATACGTCGAAATCGAAAAAAACAGCGTCTATTACTGTCGGCATAGTTCTGGCGACAATTGCATTGTCAGCAATAGGCATTCTAAGCGTCACAATGTATCGTCGGCGGAAGCAAAAGCTTGGCAGTGCGTTTGATATCACCGAAAGCCGTCTAAGTACCGATCAAACAAAAGGCATATACAGGAAGAATGGATCTCCTTTGGTTAGCCTTGAGTATGCAAATGGATGGGATCCTTTGGCCGATAGTAGAAATTTCAATGGAGATAGGCAAGATATGTTTCAAAGTTTCAGGTTCAACTTGGAAGAAGTAGAGTCGGCGACTCAGTATTTCTCGGAGCTGAATTTGTTGGGTAAGAGTAACTTTAGTGCAACATATAAAGGAGTTTTAAGAGATGGATCTATTGTTGCTATTAAGAGCATAAGTAAAACTAGTTGCAAATCAGATGAAGCTGAGTTTCTTAAAGGATTGAACATTTTGACATCATTGAGGAATGATAATTTGGTGAGGTTGAGAGGATTTTGTTGTTCAAGGGGACGAGGTGAATGCTTCTTGGTTTATGATTTTGTTTCGAATGGAAATTTGTCACAATATCTCGATGTGAAGGAAGGTGATGGTGAAGTCCTTGAATGGTCAACTAGAGTTTCTATTGTAAAAGGAATTGCTAAAGGCTTAGCTTATTTGCATAAATACAAACCAAACAAACCAGCTCTGGTTCACCAAAACATCTCAGCTGATAAAGTACTCATCGATCAGAGACAGAATCCGGTGCTCTCAGATTCTGGCCTATATAAGCTTCTCACAAATGATATTGTCTTCTCTTCACTAAAGGGTAGTGCCGCAAAGGGGTACCTAGCTCCAGAATACACTACCACAGGCCGGTTCACAGAAAAAAGCGATGTTTATGCTTTCGGGATCCTTCTTTTCCAGATACTCACTGGTAAGCAAAAGATCACTAGCTCAATTCGCCTCGCCGCAGAATCCTTCAAATTCCAAGAATTCATTGACCAGAATCTCCATGGAAGATTCTTTGAGTACGAGGCAGCTAAACTAGCAAGAATGGCAATCCTTTGTTCACATGACATTCCCTTTGAGAGGCCAACCATGGAAGCTATTGTTCAAGAACTTGGCAATTGTAGTAGTTGTCTTTGA 2049 0.3929 MGCSVFSFLIFSLMVFVLSPKGVCGNAELKALLDLKASLDPEGIFLSSWTKNGNPCDDSFEGVACNEKGQVANVSLQGKGLSGKLSPAIGDLKHLTGLYLHYNSLYGDIPREVANLTQLSDLYLNVNHFSGEIPSQIGKMENLQVLQLCYNQLTGSIPTQLGDLKKLSVLALQSNKLAGAIPASLGDLGMLMRLDLSSNNLFGSIPTKLAEAPFLQVLDVHNNTLSGNVPPALKRLDDKFVYEYNLGLCGDGFSSLKACNASDHANPNRPEPYGARVGGIPKEIPETADIKLPCNTTRCQNTSKSKKTASITVGIVLATIALSAIGILSVTMYRRRKQKLGSAFDITESRLSTDQTKGIYRKNGSPLVSLEYANGWDPLADSRNFNGDRQDMFQSFRFNLEEVESATQYFSELNLLGKSNFSATYKGVLRDGSIVAIKSISKTSCKSDEAEFLKGLNILTSLRNDNLVRLRGFCCSRGRGECFLVYDFVSNGNLSQYLDVKEGDGEVLEWSTRVSIVKGIAKGLAYLHKYKPNKPALVHQNISADKVLIDQRQNPVLSDSGLYKLLTNDIVFSSLKGSAAKGYLAPEYTTTGRFTEKSDVYAFGILLFQILTGKQKITSSIRLAAESFKFQEFIDQNLHGRFFEYEAAKLARMAILCSHDIPFERPTMEAIVQELGNCSSCL* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4502 682 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Tpr2g4502 682 Gene3D Ribonuclease Inhibitor 27 139 IPR032675 -
Tpr2g4502 682 Gene3D Phosphorylase Kinase; domain 1 381 488 - -
Tpr2g4502 682 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 1 680 - -
Tpr2g4502 682 Gene3D Transferase(Phosphotransferase) domain 1 489 681 - -
Tpr2g4502 682 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 1 680 - -
Tpr2g4502 682 ProSiteProfiles Protein kinase domain profile. 410 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g4502 682 Gene3D Ribonuclease Inhibitor 141 251 IPR032675 -
Tpr2g4502 682 SUPERFAMILY L domain-like 24 234 - -
Tpr2g4502 682 SUPERFAMILY Protein kinase-like (PK-like) 388 675 IPR011009 -
Tpr2g4502 682 Pfam Protein tyrosine and serine/threonine kinase 414 675 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4502 Tpr-Chr2 49598546 49602517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4502 9 523 Miscellaneous Gene Families AT4G22730 55.977 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Tpr2g4502 PK_Tyr_Ser-Thr 7.6e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4502 - - gmx:100789253 1155.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4502 2 49598546 49602517 Tpr1g1726 1 16526287 16529762 PCT