Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4493 ATGGAAGAAAGAGAGATTTTTGGTTCTGGGCATGCTGTTAATGTTAATCAGGCCCCACAGAGCTTCAACTTAGCTCAAAATTCATTGAATTTTTCTGGGCCCACAGGAGAGTTGCCGACTCCGGCGAGTGCACCGGCTGCGGCTGTTGGCGGTATGGAGGTAAAGAAGAAGAGGGGTAGGCCTAGGAAGTCTGAATCTGGAAGTAAACCGGCGTTGTCGCCTATGCCGATTTCGGCCTCCATTCCTTTGACTGGAGATTTCTCTGGTTGGAAAAGTGGTGGAGGGAAGCCTTTTGAATCAATAAAAAAGCCTTTGAAGTTAAATGATTTTGATGAAGGTAATTTTGATCAAGATGATGGAACAGCTTCCCCTGGTTCCAATTTCAAAACTCACGTGCTTACAGTAAATTCCGGAGAGGATGTCTCGATGAAAATCATGTCTCTCTCTCAACAAGAATATCATACTATATCCATTCTATCTGCGACTGGCACAATTTCCAATGTCACACTTCGCCAGTCGGATGCTAGTGGCGGTACTTCGACGTATGAGGGAATGTTTGAGATTCTTTCCTTGAGCGGCTCATTTGTGCCAACCGAGAATGGACTGACAAAGAGCAGAGCTGGTAGAATGAGTGTCTCATTGGCAGGTCCTAATGGTCGTGTTTTTGGGGGTGCACTGGCTGGTTTGCTTGTAGCTGCTGGTTCTGTGCAGGTTGTGGTTGCGAGTTTTCAACCAGAGCAGCAGAAACCAAAGAAGCAAAGGACCGATTATACGTCACCACCTGCCCCTCCTACATCATCTCATATTAATAATCATGTTTCTGCTGAACAATTGAAACCTATCATGTCACCGGCCGGCTTTAACTTTGCTTCTTTCGGCAATGGCCAAGGCTCTGGCAACTCATCATCATCCGCAGATGATGATGAGCATGTCTAA 936 0.4615 MEEREIFGSGHAVNVNQAPQSFNLAQNSLNFSGPTGELPTPASAPAAAVGGMEVKKKRGRPRKSESGSKPALSPMPISASIPLTGDFSGWKSGGGKPFESIKKPLKLNDFDEGNFDQDDGTASPGSNFKTHVLTVNSGEDVSMKIMSLSQQEYHTISILSATGTISNVTLRQSDASGGTSTYEGMFEILSLSGSFVPTENGLTKSRAGRMSVSLAGPNGRVFGGALAGLLVAAGSVQVVVASFQPEQQKPKKQRTDYTSPPAPPTSSHINNHVSAEQLKPIMSPAGFNFASFGNGQGSGNSSSSADDDEHV* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4493 311 MobiDBLite consensus disorder prediction 292 311 - -
Tpr2g4493 311 MobiDBLite consensus disorder prediction 245 277 - -
Tpr2g4493 311 Gene3D - 129 259 - -
Tpr2g4493 311 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 7 279 IPR039605 GO:0003680
Tpr2g4493 311 SUPERFAMILY AF0104/ALDC/Ptd012-like 126 248 - -
Tpr2g4493 311 CDD DUF296 129 243 IPR005175 -
Tpr2g4493 311 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 7 279 - -
Tpr2g4493 311 MobiDBLite consensus disorder prediction 33 77 - -
Tpr2g4493 311 Pfam Plants and Prokaryotes Conserved (PCC) domain 129 244 IPR005175 -
Tpr2g4493 311 ProSiteProfiles PPC domain profile profile. 125 265 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4493 Tpr-Chr2 49423403 49428374 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4493 40 254 AT-hook Motif Nuclear Localized (AHL) Family AT5G62260 55.844 1.61e-65 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4493 - - cam:101510032 402.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4493 2 49423403 49428374 Tpr2g4493 2 49423403 49428374 ECH
Tpr2g4493 2 49423403 49428374 Tpr1g1729 1 16561571 16566349 PCT