Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4473 ATGAAGAAACTTAATGAAATTAGCACCCTCTTTGGGATAGATGCATGTACAATAATCTATGATCAAAACAATCCTCAAGCAGAGGTTTGGCCATCAGATTCCGGAGTCAAAAGTGTGTTATTTAGGTTTGGAAGTTTGCCTGAATTTGCACGAAGCAAAAAGATGGTGGATCAAGAGGCCTTCTTAAGGGAAAGTATAGAGAAAGCCTGTGATCAGTGGAAGAAACAAAGGGAGGTAACTAGAAAGAAGGAAATGGTCAATATAGTTGATCATTACATTCGTAGTGGAGAATTTAATAGCAATTTAATGAGCAATGATGATCTCAATGACTTCTCATCTTTTATTCATGATAATTATCTGAAAGAAATCGATCGAAAAATGAAAGGAATGCAAATTGAAACCCAAGAGCCGGTGAGAAATGGAGGTGATGTTATGAATGGAACAGAGGAACGTGAAATTATCGGTCATGCCCAAGGTTTGGTGAGCGCAGGTGAAGATCATATAGGAAATATGGGTCAAAGAGAACCTAGACAGTGA 537 0.3799 MKKLNEISTLFGIDACTIIYDQNNPQAEVWPSDSGVKSVLFRFGSLPEFARSKKMVDQEAFLRESIEKACDQWKKQREVTRKKEMVNIVDHYIRSGEFNSNLMSNDDLNDFSSFIHDNYLKEIDRKMKGMQIETQEPVRNGGDVMNGTEEREIIGHAQGLVSAGEDHIGNMGQREPRQ* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4473 178 Coils Coil 63 83 - -
Tpr2g4473 178 SUPERFAMILY SRF-like 1 66 IPR036879 GO:0003677|GO:0046983
Tpr2g4473 178 PANTHER MADS BOX PROTEIN 1 135 - -
Tpr2g4473 178 PANTHER MADS-BOX TRANSCRIPTION FACTOR FAMILY PROTEIN 1 135 - -
Tpr2g4473 178 Gene3D - 1 67 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4473 Tpr-Chr2 49163831 49164367 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4473 4 142 Type I MADS-box Gene Family AT5G48670 39.716 2.30e-25 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4473 - - cam:101496969 182.956