Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4465 ATGGCTAATTTCCATAAAATTCTCCACCTCTTCACCATACTTATCTTCCTCAATACTTTCAAATCTACCAATTCATGGGATGACCCTTTTTTCCTATACCAATATTGCTCAAGCAACACAACATCAGCCAATACTTCCTTCCAATTCGACCTCACCACCCTCCTCTCTTCCTTATCATCATTTGCCACAAAAACCAACACAAAATTCTACAACACAACATTCATAGGGAACAACCCTTCTGACACAATCTATGGCATGTTCTTATGTAGAAGTGATGTTCCATCTCAACTATGTCAACAATGTATAGTCAATGCAACACAAAAACTTTCCTCACAATGTTCTTTGTCTAAAGAAGGTGTTGTTTGGTATAATGAATGTATGGTTTGGTATTCAACATCATTTATTTTCTCAACTATTGCAAGAACTTCACCTAGTTTTTACCTTTTGAACACTGACAAAGTTTCAGACACAAAAAGTTTCATGAGTTTATTGTTTTCTACAATGAACAAATCAGCTGATGAAGCTTCTTTTGGTGATGACAAAAAATTTGCAACAAATGAAAAAACTATATCAAAATTTCAAACCCTTTATTGTTTAACTCAATGTACACCAAATTTATCACCACATGAATGTAGAATTTGTCTAAGTGGATTAATAAATCAACTTCCAATGTGTTGTGAAGGTAGAGTTGGAGGAAGAGTTCTTAATCCAAGTTGTAATATTAGGTATGAATTTTACCCTTTTTATCTCAAATCTATTGGTTCATCAAATCCTTCATCACAACAAATTCTACTTCCACAAACAAAAAATTCATATGATGATTCAATGTTTTTAGAACAACCTTTTTACCTTTCACACAATTGTTCAAGTAACAAAAACTTTACTTTTAGCAACACTTTCAAAGTTCATCTCACAACCCTTTTTTCTTACTTATCTTCTAATGCCACCAAAAGTCTATTTCATAAAGTTGATGTGGCAAATTCAACTTTTGGACTCTTCATGTGTCGTGGTGATGTTTCTTTTTCCATATGTGAATTATGTGTGAAAAATGCAACACAAAGAATAACCAAAGAGTGTGACAATTTTCAAGAGGGTATAATTTGGTATAATCAATGTATGATTAGATATTCAAATTATAATTTCTTCTCTTTAGTGGACAAAAATCATGTGTATTATGAGATGAATGTTACTAGTGATTCTAGTCCTAACAAGGAGAAAAATTTGTTCAATTTTGTAATATCAACTACTTTATCAAATGTGGCAATTGTGGCTGGTGATAGTGATGAGAGATATGGGACAAAATCATTGAAATTGAATGATTTACAAACACTTTATACACTTGGTCAATGTACACAAGATTTAACAAGTGATGATTGCAAAGGTTGTTTAGGAGATGTTATTGGAAATGGAATTCCTTGGCCTTATTTGGGAAGTGTTGGTGGAAGAGTTTTATATCCTAGCTGCAATTTGAGGTTTGAATTGTTTCAATTTTATAAGGACAGTGATAATGTTACCACACCAAGAATTAGTCATTCTTCATCAGAAAAAAGAAGAAATGGGCCACGAACAATTGCCTTGATTGTTGTGCTCACAATTGTTCCAGTGATACTCTTCTTTGTTGGATGCTATTTGCTAAAGAGAAAATCAAGAAAGAGTTTTAGGTCTATGCTTAGAGAAAATTTTGGTCAAGAAAGTGCAACTTTAGAGCCATTGCAATTTGACTTAGCTGTAATTGAAGCAGCAACCAACAAATTTTCAAATGAAAATTTCATTGGCAAAGGTGGATTTGGAGAAGTTTACAAGGGCATACTTTTGGATGGACGGCAAATAGCGGTAAAAAGACTCTCAAAAAGTTCTACGCAAGGTGCAAAAGAGTTCAAGAATGAAGTTTTGTTGATCGCTAAACTTCAACATCGAAATCTAGTCACATTCATTGGTTTTTGCCTCGAAGAACAAGAAAAAATCCTTATTTATGAATATGTGCCAAACAAGGGCCTTGATCAATTTTTATTTGACTTTAAACGTTCAAAGATTTTAAGTTGGTTGGAACGTTACAATATTATAAGAGGAATTGCTCATGGAATTCTCTATCTACATGAACATTCTCGGCTTAAAGTTATTCATCGTGACCTCAAACCTAGTAATATTTTATTGGATGAAGACATGATTCCAAAAATATCAGATTTTGGTCTTGCAAGAATTGTTGAATTAAACCAAGACAAAGGAAGTACCAATAGAATTGTCGGCACATTAGGTTATATGTCTCCAGAATATGCAATGCTCGGACAATTTTCAGAGAAATCTGACGTTTATAGTTTTGGAGTCATGGTTTTAGAAATTATTACTGGAAAGAAGAATGTAAGGTCTTATGAATCACTTGTTGGTGATAGCTTCTTGAGTTATGTTTGGAGACAATGGAGGGATAAAGTACCATTAAGCATATTAGACTCAAACATCAAAGGAACTTATTCTGAATTTGAAGTCATTAAATGCATTCAAATTGGTTTATTATGTGTTCAACAGTTCCCTGATGCAAGGCCAACAATGGTAACAATTGTTTCATATCTTAACAATGATTTCATTGAATTGCCAACTCCTCAAGAACCTGCATTTTTGTTCCATGATCAAATGGGTGGTGCAAAAGGGATTCCACAAGATTCAAGTTCTAGTCAATCTATAAATAGTTGCACACCTTTAACTACCAATGACTTGTCTATAACTGAATTTCTTCCTCGCTAG 2739 0.333 MANFHKILHLFTILIFLNTFKSTNSWDDPFFLYQYCSSNTTSANTSFQFDLTTLLSSLSSFATKTNTKFYNTTFIGNNPSDTIYGMFLCRSDVPSQLCQQCIVNATQKLSSQCSLSKEGVVWYNECMVWYSTSFIFSTIARTSPSFYLLNTDKVSDTKSFMSLLFSTMNKSADEASFGDDKKFATNEKTISKFQTLYCLTQCTPNLSPHECRICLSGLINQLPMCCEGRVGGRVLNPSCNIRYEFYPFYLKSIGSSNPSSQQILLPQTKNSYDDSMFLEQPFYLSHNCSSNKNFTFSNTFKVHLTTLFSYLSSNATKSLFHKVDVANSTFGLFMCRGDVSFSICELCVKNATQRITKECDNFQEGIIWYNQCMIRYSNYNFFSLVDKNHVYYEMNVTSDSSPNKEKNLFNFVISTTLSNVAIVAGDSDERYGTKSLKLNDLQTLYTLGQCTQDLTSDDCKGCLGDVIGNGIPWPYLGSVGGRVLYPSCNLRFELFQFYKDSDNVTTPRISHSSSEKRRNGPRTIALIVVLTIVPVILFFVGCYLLKRKSRKSFRSMLRENFGQESATLEPLQFDLAVIEAATNKFSNENFIGKGGFGEVYKGILLDGRQIAVKRLSKSSTQGAKEFKNEVLLIAKLQHRNLVTFIGFCLEEQEKILIYEYVPNKGLDQFLFDFKRSKILSWLERYNIIRGIAHGILYLHEHSRLKVIHRDLKPSNILLDEDMIPKISDFGLARIVELNQDKGSTNRIVGTLGYMSPEYAMLGQFSEKSDVYSFGVMVLEIITGKKNVRSYESLVGDSFLSYVWRQWRDKVPLSILDSNIKGTYSEFEVIKCIQIGLLCVQQFPDARPTMVTIVSYLNNDFIELPTPQEPAFLFHDQMGGAKGIPQDSSSSQSINSCTPLTTNDLSITEFLPR* 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4465 912 ProSitePatterns Protein kinases ATP-binding region signature. 591 613 IPR017441 GO:0005524
Tpr2g4465 912 SUPERFAMILY Protein kinase-like (PK-like) 568 874 IPR011009 -
Tpr2g4465 912 ProSiteProfiles Gnk2-homologous domain profile. 282 381 IPR002902 -
Tpr2g4465 912 ProSiteProfiles Protein kinase domain profile. 585 861 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g4465 912 Gene3D - 388 497 IPR038408 -
Tpr2g4465 912 Gene3D - 28 134 IPR038408 -
Tpr2g4465 912 Gene3D - 143 248 IPR038408 -
Tpr2g4465 912 Gene3D - 282 381 IPR038408 -
Tpr2g4465 912 ProSitePatterns Serine/Threonine protein kinases active-site signature. 706 718 IPR008271 GO:0004672|GO:0006468
Tpr2g4465 912 ProSiteProfiles Gnk2-homologous domain profile. 142 248 IPR002902 -
Tpr2g4465 912 Gene3D Transferase(Phosphotransferase) domain 1 661 862 - -
Tpr2g4465 912 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 274 504 - -
Tpr2g4465 912 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 513 902 - -
Tpr2g4465 912 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 17 258 - -
Tpr2g4465 912 CDD STKc_IRAK 591 858 - -
Tpr2g4465 912 ProSiteProfiles Gnk2-homologous domain profile. 391 497 IPR002902 -
Tpr2g4465 912 Pfam Salt stress response/antifungal 404 493 IPR002902 -
Tpr2g4465 912 Pfam Salt stress response/antifungal 158 245 IPR002902 -
Tpr2g4465 912 Pfam Salt stress response/antifungal 288 379 IPR002902 -
Tpr2g4465 912 Pfam Salt stress response/antifungal 36 132 IPR002902 -
Tpr2g4465 912 ProSiteProfiles Gnk2-homologous domain profile. 29 135 IPR002902 -
Tpr2g4465 912 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 274 504 - -
Tpr2g4465 912 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 17 258 - -
Tpr2g4465 912 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 513 902 - -
Tpr2g4465 912 SMART serkin_6 585 861 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g4465 912 Pfam Protein kinase domain 586 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g4465 912 Gene3D Phosphorylase Kinase; domain 1 546 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4465 Tpr-Chr2 49019599 49032706 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4465 281 912 Receptor kinase-like Gene Family AT4G05200 44.495 1.61e-177 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr2g4465 Pkinase 3.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4465 - - gmx:100806048 1245.34