Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr2g4465 | ATGGCTAATTTCCATAAAATTCTCCACCTCTTCACCATACTTATCTTCCTCAATACTTTCAAATCTACCAATTCATGGGATGACCCTTTTTTCCTATACCAATATTGCTCAAGCAACACAACATCAGCCAATACTTCCTTCCAATTCGACCTCACCACCCTCCTCTCTTCCTTATCATCATTTGCCACAAAAACCAACACAAAATTCTACAACACAACATTCATAGGGAACAACCCTTCTGACACAATCTATGGCATGTTCTTATGTAGAAGTGATGTTCCATCTCAACTATGTCAACAATGTATAGTCAATGCAACACAAAAACTTTCCTCACAATGTTCTTTGTCTAAAGAAGGTGTTGTTTGGTATAATGAATGTATGGTTTGGTATTCAACATCATTTATTTTCTCAACTATTGCAAGAACTTCACCTAGTTTTTACCTTTTGAACACTGACAAAGTTTCAGACACAAAAAGTTTCATGAGTTTATTGTTTTCTACAATGAACAAATCAGCTGATGAAGCTTCTTTTGGTGATGACAAAAAATTTGCAACAAATGAAAAAACTATATCAAAATTTCAAACCCTTTATTGTTTAACTCAATGTACACCAAATTTATCACCACATGAATGTAGAATTTGTCTAAGTGGATTAATAAATCAACTTCCAATGTGTTGTGAAGGTAGAGTTGGAGGAAGAGTTCTTAATCCAAGTTGTAATATTAGGTATGAATTTTACCCTTTTTATCTCAAATCTATTGGTTCATCAAATCCTTCATCACAACAAATTCTACTTCCACAAACAAAAAATTCATATGATGATTCAATGTTTTTAGAACAACCTTTTTACCTTTCACACAATTGTTCAAGTAACAAAAACTTTACTTTTAGCAACACTTTCAAAGTTCATCTCACAACCCTTTTTTCTTACTTATCTTCTAATGCCACCAAAAGTCTATTTCATAAAGTTGATGTGGCAAATTCAACTTTTGGACTCTTCATGTGTCGTGGTGATGTTTCTTTTTCCATATGTGAATTATGTGTGAAAAATGCAACACAAAGAATAACCAAAGAGTGTGACAATTTTCAAGAGGGTATAATTTGGTATAATCAATGTATGATTAGATATTCAAATTATAATTTCTTCTCTTTAGTGGACAAAAATCATGTGTATTATGAGATGAATGTTACTAGTGATTCTAGTCCTAACAAGGAGAAAAATTTGTTCAATTTTGTAATATCAACTACTTTATCAAATGTGGCAATTGTGGCTGGTGATAGTGATGAGAGATATGGGACAAAATCATTGAAATTGAATGATTTACAAACACTTTATACACTTGGTCAATGTACACAAGATTTAACAAGTGATGATTGCAAAGGTTGTTTAGGAGATGTTATTGGAAATGGAATTCCTTGGCCTTATTTGGGAAGTGTTGGTGGAAGAGTTTTATATCCTAGCTGCAATTTGAGGTTTGAATTGTTTCAATTTTATAAGGACAGTGATAATGTTACCACACCAAGAATTAGTCATTCTTCATCAGAAAAAAGAAGAAATGGGCCACGAACAATTGCCTTGATTGTTGTGCTCACAATTGTTCCAGTGATACTCTTCTTTGTTGGATGCTATTTGCTAAAGAGAAAATCAAGAAAGAGTTTTAGGTCTATGCTTAGAGAAAATTTTGGTCAAGAAAGTGCAACTTTAGAGCCATTGCAATTTGACTTAGCTGTAATTGAAGCAGCAACCAACAAATTTTCAAATGAAAATTTCATTGGCAAAGGTGGATTTGGAGAAGTTTACAAGGGCATACTTTTGGATGGACGGCAAATAGCGGTAAAAAGACTCTCAAAAAGTTCTACGCAAGGTGCAAAAGAGTTCAAGAATGAAGTTTTGTTGATCGCTAAACTTCAACATCGAAATCTAGTCACATTCATTGGTTTTTGCCTCGAAGAACAAGAAAAAATCCTTATTTATGAATATGTGCCAAACAAGGGCCTTGATCAATTTTTATTTGACTTTAAACGTTCAAAGATTTTAAGTTGGTTGGAACGTTACAATATTATAAGAGGAATTGCTCATGGAATTCTCTATCTACATGAACATTCTCGGCTTAAAGTTATTCATCGTGACCTCAAACCTAGTAATATTTTATTGGATGAAGACATGATTCCAAAAATATCAGATTTTGGTCTTGCAAGAATTGTTGAATTAAACCAAGACAAAGGAAGTACCAATAGAATTGTCGGCACATTAGGTTATATGTCTCCAGAATATGCAATGCTCGGACAATTTTCAGAGAAATCTGACGTTTATAGTTTTGGAGTCATGGTTTTAGAAATTATTACTGGAAAGAAGAATGTAAGGTCTTATGAATCACTTGTTGGTGATAGCTTCTTGAGTTATGTTTGGAGACAATGGAGGGATAAAGTACCATTAAGCATATTAGACTCAAACATCAAAGGAACTTATTCTGAATTTGAAGTCATTAAATGCATTCAAATTGGTTTATTATGTGTTCAACAGTTCCCTGATGCAAGGCCAACAATGGTAACAATTGTTTCATATCTTAACAATGATTTCATTGAATTGCCAACTCCTCAAGAACCTGCATTTTTGTTCCATGATCAAATGGGTGGTGCAAAAGGGATTCCACAAGATTCAAGTTCTAGTCAATCTATAAATAGTTGCACACCTTTAACTACCAATGACTTGTCTATAACTGAATTTCTTCCTCGCTAG | 2739 | 0.333 | MANFHKILHLFTILIFLNTFKSTNSWDDPFFLYQYCSSNTTSANTSFQFDLTTLLSSLSSFATKTNTKFYNTTFIGNNPSDTIYGMFLCRSDVPSQLCQQCIVNATQKLSSQCSLSKEGVVWYNECMVWYSTSFIFSTIARTSPSFYLLNTDKVSDTKSFMSLLFSTMNKSADEASFGDDKKFATNEKTISKFQTLYCLTQCTPNLSPHECRICLSGLINQLPMCCEGRVGGRVLNPSCNIRYEFYPFYLKSIGSSNPSSQQILLPQTKNSYDDSMFLEQPFYLSHNCSSNKNFTFSNTFKVHLTTLFSYLSSNATKSLFHKVDVANSTFGLFMCRGDVSFSICELCVKNATQRITKECDNFQEGIIWYNQCMIRYSNYNFFSLVDKNHVYYEMNVTSDSSPNKEKNLFNFVISTTLSNVAIVAGDSDERYGTKSLKLNDLQTLYTLGQCTQDLTSDDCKGCLGDVIGNGIPWPYLGSVGGRVLYPSCNLRFELFQFYKDSDNVTTPRISHSSSEKRRNGPRTIALIVVLTIVPVILFFVGCYLLKRKSRKSFRSMLRENFGQESATLEPLQFDLAVIEAATNKFSNENFIGKGGFGEVYKGILLDGRQIAVKRLSKSSTQGAKEFKNEVLLIAKLQHRNLVTFIGFCLEEQEKILIYEYVPNKGLDQFLFDFKRSKILSWLERYNIIRGIAHGILYLHEHSRLKVIHRDLKPSNILLDEDMIPKISDFGLARIVELNQDKGSTNRIVGTLGYMSPEYAMLGQFSEKSDVYSFGVMVLEIITGKKNVRSYESLVGDSFLSYVWRQWRDKVPLSILDSNIKGTYSEFEVIKCIQIGLLCVQQFPDARPTMVTIVSYLNNDFIELPTPQEPAFLFHDQMGGAKGIPQDSSSSQSINSCTPLTTNDLSITEFLPR* | 913 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr2g4465 | 912 | ProSitePatterns | Protein kinases ATP-binding region signature. | 591 | 613 | IPR017441 | GO:0005524 | |
Tpr2g4465 | 912 | SUPERFAMILY | Protein kinase-like (PK-like) | 568 | 874 | IPR011009 | - | |
Tpr2g4465 | 912 | ProSiteProfiles | Gnk2-homologous domain profile. | 282 | 381 | IPR002902 | - | |
Tpr2g4465 | 912 | ProSiteProfiles | Protein kinase domain profile. | 585 | 861 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr2g4465 | 912 | Gene3D | - | 388 | 497 | IPR038408 | - | |
Tpr2g4465 | 912 | Gene3D | - | 28 | 134 | IPR038408 | - | |
Tpr2g4465 | 912 | Gene3D | - | 143 | 248 | IPR038408 | - | |
Tpr2g4465 | 912 | Gene3D | - | 282 | 381 | IPR038408 | - | |
Tpr2g4465 | 912 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 706 | 718 | IPR008271 | GO:0004672|GO:0006468 | |
Tpr2g4465 | 912 | ProSiteProfiles | Gnk2-homologous domain profile. | 142 | 248 | IPR002902 | - | |
Tpr2g4465 | 912 | Gene3D | Transferase(Phosphotransferase) domain 1 | 661 | 862 | - | - | |
Tpr2g4465 | 912 | PANTHER | CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN | 274 | 504 | - | - | |
Tpr2g4465 | 912 | PANTHER | CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN | 513 | 902 | - | - | |
Tpr2g4465 | 912 | PANTHER | CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN | 17 | 258 | - | - | |
Tpr2g4465 | 912 | CDD | STKc_IRAK | 591 | 858 | - | - | |
Tpr2g4465 | 912 | ProSiteProfiles | Gnk2-homologous domain profile. | 391 | 497 | IPR002902 | - | |
Tpr2g4465 | 912 | Pfam | Salt stress response/antifungal | 404 | 493 | IPR002902 | - | |
Tpr2g4465 | 912 | Pfam | Salt stress response/antifungal | 158 | 245 | IPR002902 | - | |
Tpr2g4465 | 912 | Pfam | Salt stress response/antifungal | 288 | 379 | IPR002902 | - | |
Tpr2g4465 | 912 | Pfam | Salt stress response/antifungal | 36 | 132 | IPR002902 | - | |
Tpr2g4465 | 912 | ProSiteProfiles | Gnk2-homologous domain profile. | 29 | 135 | IPR002902 | - | |
Tpr2g4465 | 912 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 274 | 504 | - | - | |
Tpr2g4465 | 912 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 17 | 258 | - | - | |
Tpr2g4465 | 912 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 513 | 902 | - | - | |
Tpr2g4465 | 912 | SMART | serkin_6 | 585 | 861 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr2g4465 | 912 | Pfam | Protein kinase domain | 586 | 788 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr2g4465 | 912 | Gene3D | Phosphorylase Kinase; domain 1 | 546 | 660 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr2g4465 | Tpr-Chr2 | 49019599 | 49032706 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr2g4465 | 281 | 912 | Receptor kinase-like Gene Family | AT4G05200 | 44.495 | 1.61e-177 | 528 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Tpr2g4465 | Pkinase | 3.9e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr2g4465 | - | - | gmx:100806048 | 1245.34 |