Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4464 ATGGATATCACTCGGATTCGGGTTTGGGTTCTTAGTGTGGAGAAATTTGATTACTTCAACTGTGACACAAGTGCACCAATAACTACTTTCACCAATGGAAAGAGCACTTTTAATCTTGACAGATCAGGACCTTTCTATTTCATAAGTGGAACTGATGATCATTGCAACCATGGCCAAAAATTGCTCGTTGAAGTTATGGCGCCGCATTCAATTCCAGCATCTCCACCTACCACCATTGCAGTTCCGCCTGAAGGTTCATCACCGATCATGGCTCCTTCGGATTCACCTTATTCTTCTGATTCCGTGGATCAGGCTACTTCATCTTCCACCATGGTGCTTGCTTCAAGTTTTCTGTCTACTTTGATCACATTTGGAATTGTGATGATGTTAGCACTCTAA 399 0.4261 MDITRIRVWVLSVEKFDYFNCDTSAPITTFTNGKSTFNLDRSGPFYFISGTDDHCNHGQKLLVEVMAPHSIPASPPTTIAVPPEGSSPIMAPSDSPYSSDSVDQATSSSTMVLASSFLSTLITFGIVMMLAL* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4464 132 PANTHER EARLY NODULIN-LIKE PROTEIN 2 10 83 - -
Tpr2g4464 132 ProSiteProfiles Phytocyanin domain profile. 1 67 IPR003245 GO:0009055
Tpr2g4464 132 Gene3D - 7 66 IPR008972 -
Tpr2g4464 132 Pfam Plastocyanin-like domain 10 59 IPR003245 GO:0009055
Tpr2g4464 132 PANTHER BLUE COPPER PROTEIN 10 83 IPR039391 GO:0009055
Tpr2g4464 132 MobiDBLite consensus disorder prediction 81 102 - -
Tpr2g4464 132 SUPERFAMILY Cupredoxins 10 66 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4464 Tpr-Chr2 49013493 49015979 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4464 10 70 Phytocyanin Superfamily AT1G79800 55.738 2.28e-20 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4464 - - gmx:100783893 134.806