Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4461 ATGGCTTACTCTAAAATTCTCTTTTTCTCCATCATTGTTAGATTCCTTACTTTTGCAACTATCATGGCACAAGACTCTTCATTTTTTCTAAATAAATTTTGCTCCCCTGACCTTACCAAATCCAACAGCAACTTCCATGACAATCTCATCAAACTACTCTCTTCATTATCATCAAAAGCCATAAGCAACACTGAATTCTACAACCCTATTATTGGTACAAATCCCTCAGATTCTATCTATGGAATGTTCATGTGTAGGGGTGATGTGGATTCTCAACTTTGTCATGAATGCATAGGTAATGCAACCCAACATCTATCCTCAGAGTGTTCTTTGTCCAAACAAGCTTCGATTTGGTACAACGAGTGCACGGTTCGATACTCTAACGATTCATTCTTTTCGGTCGTTGATATGATGCCTGGTTTTTACATGTGCAATACCGTGAATTTCTCAAACACAAAAAGCTTCACGCCTTTCTTGTTTTCGACCATGAATCTAATTGCCGATGAAGCAGCTAGTGACAAGAAGAAATTTGCAACAAATGAACGAGTTTTCGAATTTCAAACACTTTATTGTCTAGCTCAGTGCACGTCAGACTTATCGTCGAAAGTTTGTGGAACCTGTCTGCGTAGTGCTATCAACCAACTTCCAATTCATTGTGATGGAAAACTAGGTGGGAGATTTCTTTATCCTAGTTGTAATGTTAGGTATGAACTATATCCTTTTTATAGGTCTATTAATGTTCCTTCACCAAATGAGCTTGCTCCTCAAACAAAAGATTCGATTTCGAAACAAGATTCAAGATTTTCAGAAGATCCATTTTATCTTTCCTATAATTGCTCTAGTAACCACAATACAATCACTTCAAAAAATTTCAACTTACTTCTCTCTTATCTGGTGTCCAATGCCACCGCCGGAAAACTATATCATAGAGTTATAATGGACGAAATTGTGTACGGACTCTTCATGTGTCGAGGTGACCTCCCTTCTCGCCTTTGTGTTCAATGCGTAAAAAATGCAAAAGATCGAATATTCTCCACGTGTGTTTCATCCTCGGAGGGTATAATTTGGTATAGCCATTGCTTGCTTCGCTATTCAAGTCAATATTTTTTCCCTAACATCGCCGAAACTAGACCTATGTACCACGATATAAACATCACCAATCATTTCATCTCGGACCAAAACTTGTTCACTAGTACATTATCGAATCAGTTATCTGAACTTGCGAATGCAACGGGGAATAGTGATGAAAGATATATGATAAATTCATTAAAATTGAATGATATACAAACCTTATATACTCTTGAACAATGTACACCATATTTGTCTCCTCAGGAATGCATTTCTTGTCTAAATGATATGATAAGTACACAAATTCCATGGTCATTCTTGGGAAGTGTTGGTGGAAGAATTATATATCCTAACTGTAATCTGAGATTTGAATTGTTCCAATTTTACATCGAGAGCGATGAAGCTCGGTCGTCTAGGAATCCTTCAAAAGAAGCAGAAAAGCGGAAAATTGTCTTAATCGTTGTCCCTACCATTATTTTGGTGATGCTCTTTTCTATTGGATACTATTTGCTAAAGAGAAGGGCAAGAAAGAGTCGTAGGACTATTCTTCGAGATAATTTTGGTAAAGAAAGTGACACTTTAGAACCACTACAATTCCAATGGTCAGTAATTGAAGCAGCAACCAACAACTTTTCTAATGACAATTATATTGGCAAAGGCGGATTTGGAGAGGTTTACAAGGGTATCCTTTTGGATGGACGAGAAGTTGCTATAAAGAGGCTTTCAAGAGGTTCTAAGCAAGGTGTAGAGGAGTTCAAGAATGAAGTTTTATTGATAGCAAAGCTTCAACATAGAAATCTAGTCACATTTATTGGTTTTTGCCTTGAAGGACATGAGAATATACTTATTTATGAATTTGTGCCCAATAAAAGTCTTGATTACTTTTTATTTGATTCCCAACACCAAAAGTTGTTAACTTGGGTTGAACGCTTTAACATCATAGGAGGAATTGTTCGAGGAATTCTTTATTTGCATGAACATTCTCGACTCAAAGTTATACATCGTGATCTCAAACCTAGTAATATTCTGTTAGATGAAAATATGATTCCTAAAATTTCTGATTTTGGTCTAGCTCGAATTATGGAAATAAGTCAAGACGAAGGAAGTACAAATAGAATTGTTGGAACATATGGTTATATGGCTCCGGAATATGCTATGTTTGGACAATTTTCTGAAAAGTCGGACGTTTATAGTTTTGGAGTCATGCTGTTGGAGATTATTGCTGGAAAGAAGAACATAAGTTCATATGCACAACATCATGTTGCTGATAACCTCTTGAATTATGTTTGGAGACAATGGAATGATCAAACACCTTTAAGTATATTGGACCCAAAAATCAAAGAAAATTATTCAGAAACTGAATTCATCAAATGCATTCAGATTGGTCTATTATGTGTTCAACGTGACCCAGATGCTAGACCTTCAATGGTGACAATTGCTTCTTATCTTAGCAGTTATTCAATTGAATTACCATCACCACAAGAACCTGCATTTTTCTTGCATGAGAGAACTTTTTCAAATGTTGCTGCACAAGAATCAAGTTCTACTCAATTTGTTAATAGTTCTTCATTGTTATCTATCAATCAAATGTCTACTACAAATACTTTTATTCCTCGCTAG 2688 0.359 MAYSKILFFSIIVRFLTFATIMAQDSSFFLNKFCSPDLTKSNSNFHDNLIKLLSSLSSKAISNTEFYNPIIGTNPSDSIYGMFMCRGDVDSQLCHECIGNATQHLSSECSLSKQASIWYNECTVRYSNDSFFSVVDMMPGFYMCNTVNFSNTKSFTPFLFSTMNLIADEAASDKKKFATNERVFEFQTLYCLAQCTSDLSSKVCGTCLRSAINQLPIHCDGKLGGRFLYPSCNVRYELYPFYRSINVPSPNELAPQTKDSISKQDSRFSEDPFYLSYNCSSNHNTITSKNFNLLLSYLVSNATAGKLYHRVIMDEIVYGLFMCRGDLPSRLCVQCVKNAKDRIFSTCVSSSEGIIWYSHCLLRYSSQYFFPNIAETRPMYHDINITNHFISDQNLFTSTLSNQLSELANATGNSDERYMINSLKLNDIQTLYTLEQCTPYLSPQECISCLNDMISTQIPWSFLGSVGGRIIYPNCNLRFELFQFYIESDEARSSRNPSKEAEKRKIVLIVVPTIILVMLFSIGYYLLKRRARKSRRTILRDNFGKESDTLEPLQFQWSVIEAATNNFSNDNYIGKGGFGEVYKGILLDGREVAIKRLSRGSKQGVEEFKNEVLLIAKLQHRNLVTFIGFCLEGHENILIYEFVPNKSLDYFLFDSQHQKLLTWVERFNIIGGIVRGILYLHEHSRLKVIHRDLKPSNILLDENMIPKISDFGLARIMEISQDEGSTNRIVGTYGYMAPEYAMFGQFSEKSDVYSFGVMLLEIIAGKKNISSYAQHHVADNLLNYVWRQWNDQTPLSILDPKIKENYSETEFIKCIQIGLLCVQRDPDARPSMVTIASYLSSYSIELPSPQEPAFFLHERTFSNVAAQESSSTQFVNSSSLLSINQMSTTNTFIPR* 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4461 895 SMART serkin_6 567 839 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g4461 895 Gene3D Phosphorylase Kinase; domain 1 529 642 - -
Tpr2g4461 895 ProSiteProfiles Protein kinase domain profile. 567 839 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g4461 895 ProSitePatterns Protein kinases ATP-binding region signature. 573 595 IPR017441 GO:0005524
Tpr2g4461 895 ProSiteProfiles Gnk2-homologous domain profile. 269 369 IPR002902 -
Tpr2g4461 895 Pfam Protein kinase domain 569 835 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g4461 895 Pfam Salt stress response/antifungal 391 480 IPR002902 -
Tpr2g4461 895 Pfam Salt stress response/antifungal 144 239 IPR002902 -
Tpr2g4461 895 Pfam Salt stress response/antifungal 39 128 IPR002902 -
Tpr2g4461 895 Pfam Salt stress response/antifungal 284 366 IPR002902 -
Tpr2g4461 895 ProSiteProfiles Gnk2-homologous domain profile. 27 131 IPR002902 -
Tpr2g4461 895 ProSiteProfiles Gnk2-homologous domain profile. 378 484 IPR002902 -
Tpr2g4461 895 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 497 884 - -
Tpr2g4461 895 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 264 489 - -
Tpr2g4461 895 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 15 254 - -
Tpr2g4461 895 CDD STKc_IRAK 573 839 - -
Tpr2g4461 895 Gene3D Transferase(Phosphotransferase) domain 1 643 848 - -
Tpr2g4461 895 SUPERFAMILY Protein kinase-like (PK-like) 550 877 IPR011009 -
Tpr2g4461 895 ProSiteProfiles Gnk2-homologous domain profile. 137 241 IPR002902 -
Tpr2g4461 895 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 264 489 - -
Tpr2g4461 895 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 15 254 - -
Tpr2g4461 895 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 497 884 - -
Tpr2g4461 895 ProSitePatterns Serine/Threonine protein kinases active-site signature. 688 700 IPR008271 GO:0004672|GO:0006468
Tpr2g4461 895 Gene3D - 377 484 IPR038408 -
Tpr2g4461 895 Gene3D - 26 131 IPR038408 -
Tpr2g4461 895 Gene3D - 139 241 IPR038408 -
Tpr2g4461 895 Gene3D - 273 369 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4461 Tpr-Chr2 48988095 48992243 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4461 269 895 Receptor kinase-like Gene Family AT4G05200 43.333 2.36e-170 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr2g4461 Pkinase 7.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4461 - - mtr:MTR_6g055960 1236.86