Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4453 ATGTCTCTATTTACAGAAAAACTTCTCTTGATGTTTGTATTGTCGTTGCTATCAGTGCACAATGTAACTAGTGCTTATTTCAAGACGACTGTGACTATTACTAACTCTTTGTCAGGAAATTTGGACTTAAACGTTCATTGCAAATCTGCGGATGATGATCTCGGACCTCATCTTCTTCATCAAGGTCAGAGTTATGATTGGAGTTTTGGAAATAAGTTTTTTGGAGGAACATTATTCTTTTGTACCGTTCAATGGAATAATGAGATACATAGATTTGATGCATATGATCAAGATAACGATCTTTTAAAATGTTATAAAAGTAATTGTATTTGGCTTATAAAACAATCTGGACCTTGTAAGGTACACCCTGAGGAAAAGCATGATGAATGCTTTCCGTGGAAAAATTGA 408 0.3407 MSLFTEKLLLMFVLSLLSVHNVTSAYFKTTVTITNSLSGNLDLNVHCKSADDDLGPHLLHQGQSYDWSFGNKFFGGTLFFCTVQWNNEIHRFDAYDQDNDLLKCYKSNCIWLIKQSGPCKVHPEEKHDECFPWKN* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4453 135 Pfam Plant self-incompatibility protein S1 30 133 IPR010264 -
Tpr2g4453 135 PANTHER LEGUMINOSIN GROUP486 SECRETED PEPTIDE 7 130 - -
Tpr2g4453 135 PANTHER - 7 130 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4453 Tpr-Chr2 48900334 48900741 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4453 28 133 Carbohydrate Esterase AT3G16970 41.284 4.34e-23 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4453 - - mtr:MTR_1g058500 135.191