Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4426 ATGCTTCACCGTAAACTCTTTCAATCTCAGCCGTCCACTTCATCATCCTCACCACAACCACCTCACCATCACAACCACCACATCCTAATCCCTCTCCTCGCCGGAACCGCCGTTGTACTAACTCTCCTCCTCTTCTTCACCTTCCTCCGCCGCCGCACCCGAAAAAAATGCACATCACCATTCTCCATCACCGACGATGATCCACCCCACCGTTACTCCTACTCCCTCCTCCGCCGTGCAACAAACTCGTTCTCCAACCCACTCGGCCATGGCGGCTTCGGCACCGTCTTCTCCGGCACACTCTCTTCAATACCAATCGCTGTTAAGCTCATGGATACTTCCTCTCATCAAGGTGAACGCGAATTTCACAACGAACTGTTCTTCGCTTCAAAGCTTCGTTCTCTTTATATAATTCCTCCGTTAGGGTTTTCGTCTGATCCAAAACGACGTCGTTTTCTACTTGTTTATCCTTTAATGCAAAACGGTAATCTTCAAGATGCACTTTTGAAGCGTAAGTGTTCTGAACTTTTTAATTGGGAAAAAAGATTTGAAATTGTGTTGGATATTGCTAAAGGACTTTGTTATCTTCACTCTTTTGATCCTCCTGTTATACATGGTGATATAAAACCTAGTAATATTCTTTTAGATTGTGATTTTAATGCTAAAATCGGCGATTTTGGACTTGCTCGGTTGAAATCGGAGCCGGTTAGGGTTGATGTTGAGCTTTTGGGTATTGATAGTGATGATGAAATGAAGAAAAGGAATGAAAATGATGATTTGGAGTGTGGTGGTGTTCAGGTTGTGATTGATGATTGTGGATCTGTGGATAGTGTGCATACTGGTTTTTTTGAAGAGGGTGGTAATTTGGGTGTGGAGCAATCTTCGGTGGCTTCGCCGGAAACTGTTGAGATGAGAATGACTATGACAATGGCATTGGCGGCGTCACCGGGTTTTGATAAGGGGAGTGTAAAGAGTGAGAAGGATGTTGTTGGTGTTGAGGATGGTAAGAGAATTGGGAAAGGGTTGACGAGTAATTTGGTTAGGGATTGGTGGTGGAAACAGGACAATGAGGTCGCGGGTTTGACACCGGTTGGCGAAGGTAAGAAGGTGAAGGATTATGTGATGGATTGGATTGGTAGGGAAGTGAAAAGTGAAAAGAGTGAATTGGCGGGTGTGAAGATGGGTAAGCAGGAGATGAAGGAGAAGAAGAACAGGAAGCAGAAATTGGAATGGTGGGAATCAATGGACGATGAAAATTTTGGCGGGGTCGTGAAGAAGGAGAAGAAAAAGTCGGTGAGGGAATGGTGGAAGGAGGAGTATTGTGAAGAGGTTGCAAAGGAGAAAAAGAAGAGGAAGAAGAATAAGAAGACGAAAAAGGGTGTAGAAATTAACGATGACATTAGCAATGATGATAATTGGTGGATGAGTGATGATGCATTATATGGGGATAAAAAGAAGGAAAAGAGAAGAAGCAGGAATAATCGTGGTAGTGTCGATTGGTGGTTAGACGGATTTAGTGGTGAGCTATGGCGAGCACGCAGGAATAGCTTCGATTCAGCTAGTGGAGACATTCCAAAAAGTGGTGGTGTGAGTAGTACTCCAAGTATGAGAGGAACCATTTGTTATGTTGCTCCCGAGTGTGGCTATGGTGATGATGTCTCCGAAAAGTGTGACGTTTATAGCTTTGGGATCTTGTTGCTTGTTATCATTTCTGGGAGACGTCCACTTCAAGTGACCGGTTCACCGTTGTCAGAGTTTCAAAGAGCTAATCTTTTGTCATGGGCACGCCACTGTGCAAGAAACGGGAAGCTCACTGAGCTGGTTGACGAGTCTATTCAGTCATTGAATAAGGACCAAGCTCTGATCTGCATCAAAGTGGCTTTACTATGTTTGCTTAAGTCACCTGTTCGACGTCCTTCAATGAAGGAGGTTGTTGGGATGCTTAGTGGCGAGTTAGAACCACCCCAATTACCTGTTGAGTACTCACCTTCAACTCCTTCTCGCTTTCCTTTCAAATCCAGGAAGAAAGGCCAAGGCCGGTAA 2043 0.4469 MLHRKLFQSQPSTSSSSPQPPHHHNHHILIPLLAGTAVVLTLLLFFTFLRRRTRKKCTSPFSITDDDPPHRYSYSLLRRATNSFSNPLGHGGFGTVFSGTLSSIPIAVKLMDTSSHQGEREFHNELFFASKLRSLYIIPPLGFSSDPKRRRFLLVYPLMQNGNLQDALLKRKCSELFNWEKRFEIVLDIAKGLCYLHSFDPPVIHGDIKPSNILLDCDFNAKIGDFGLARLKSEPVRVDVELLGIDSDDEMKKRNENDDLECGGVQVVIDDCGSVDSVHTGFFEEGGNLGVEQSSVASPETVEMRMTMTMALAASPGFDKGSVKSEKDVVGVEDGKRIGKGLTSNLVRDWWWKQDNEVAGLTPVGEGKKVKDYVMDWIGREVKSEKSELAGVKMGKQEMKEKKNRKQKLEWWESMDDENFGGVVKKEKKKSVREWWKEEYCEEVAKEKKKRKKNKKTKKGVEINDDISNDDNWWMSDDALYGDKKKEKRRSRNNRGSVDWWLDGFSGELWRARRNSFDSASGDIPKSGGVSSTPSMRGTICYVAPECGYGDDVSEKCDVYSFGILLLVIISGRRPLQVTGSPLSEFQRANLLSWARHCARNGKLTELVDESIQSLNKDQALICIKVALLCLLKSPVRRPSMKEVVGMLSGELEPPQLPVEYSPSTPSRFPFKSRKKGQGR* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4426 680 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 677 - -
Tpr2g4426 680 MobiDBLite consensus disorder prediction 1 22 - -
Tpr2g4426 680 Gene3D Transferase(Phosphotransferase) domain 1 159 254 - -
Tpr2g4426 680 Gene3D Transferase(Phosphotransferase) domain 1 515 655 - -
Tpr2g4426 680 MobiDBLite consensus disorder prediction 656 680 - -
Tpr2g4426 680 ProSitePatterns Protein kinases ATP-binding region signature. 88 109 IPR017441 GO:0005524
Tpr2g4426 680 SMART serkin_6 82 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g4426 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Tpr2g4426 680 ProSiteProfiles Protein kinase domain profile. 82 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g4426 680 MobiDBLite consensus disorder prediction 1 23 - -
Tpr2g4426 680 Gene3D Phosphorylase Kinase; domain 1 70 157 - -
Tpr2g4426 680 Pfam Protein tyrosine and serine/threonine kinase 84 232 IPR001245 GO:0004672|GO:0006468
Tpr2g4426 680 Pfam Protein tyrosine and serine/threonine kinase 533 646 IPR001245 GO:0004672|GO:0006468
Tpr2g4426 680 PANTHER OS07G0586332 PROTEIN 1 677 IPR044576 -
Tpr2g4426 680 SUPERFAMILY Protein kinase-like (PK-like) 60 667 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4426 Tpr-Chr2 48506971 48509559 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4426 510 648 Receptor kinase-like Gene Family AT3G58690 29.655 4.54e-09 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Tpr2g4426 PK_Tyr_Ser-Thr 2.7e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4426 - - lja:Lj2g3v0473820.1 865.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4426 2 48506971 48509559 Tpr1g0681 1 5756145 5759130 PCT