Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4422 ATGACCACTATCTCATTCATTCTCCTAACTTTAGCAATTAAATACCATCATATAGTATTTCTGAAATCAACCATGGCATTCTTTTCATTAACAAAATTTACATTTCTATTCTCCTTAACATTAACATTCCTCTTAATGTTAAACTCAACCAAACCCCAAACACTATCACCAAAACCATGCAACAATCCTTACAAACAACTCAACCTTATCCTTAATCCAAATGGAACAATAACACGACCAAACAAACCACCCGAGACACCTCCTTCATTAGATCCGACCCTCCCCGTTCTCTCCAAAGATCTCATCATTAATCAATCGAAAGGCACGTGGGCGCGGATCTATGTACCCCGCAAAACACTTAATCAAACCCCCAAAAAACTTCCTCTTGTCATTTTTTTCCATGGTGGTGGATTCATTTTTCTTAGCGCGGCTTCAACAATTTTCCATGATTTTTGCTTCAACATGGCAAATGACATTGTATCGGTTGTTGCGTCTGTTGAGTATCGTCTTGCCCCGGAGCATAGACTCCCAGCTGCATATGAAGATGCAGTGGAGGCTCTGCACTGGATCAAAACTAATTATCAATCAGATGATTGGCTTAAAAATCATGTCGATTTTTCTAGTGTTTTTCTTATGGGTAGTAGTGCAGGAGGAAACATAGCGTATAACACCGGTCTCCGTGTAGAAGATGGAGATAGTGGAATTTCTAAGATGATTAAAGGACTTATACTAGTTCAGCCTTTTTTCAGTGGAATCCATAGGATGGATTCCGAACTTAGGCTTGTTAGTGATTCTCATTTGTCACTCTGTAACAATGATATGTTGTGGGAATTGTCGTTACCTGTTGGTGCTAACCGTGATCATGAGTATTGCAATCCAACAGTTGGAGATAATATTTTGAGATTGGAAAACATTAGACGACTTGGATGGAGTGTGTTGGTGACTGACTGTGACGGTGATCCACTCGTGGATCGTTCAATCGGGTTAGTGAGATTTATGGAAAAAAAAGGAGTGAGGGTTATGGGACATTTTACAAAAGGGGATTATCATGGTGTTCAAGATAGTGAGCCATTGAAAGCTAAGGAACTCTTTGTGGTGATTAAAAAGTTCATTTCATCTTTGCCTAATCAGGCAATTGAATGA 1143 0.3928 MTTISFILLTLAIKYHHIVFLKSTMAFFSLTKFTFLFSLTLTFLLMLNSTKPQTLSPKPCNNPYKQLNLILNPNGTITRPNKPPETPPSLDPTLPVLSKDLIINQSKGTWARIYVPRKTLNQTPKKLPLVIFFHGGGFIFLSAASTIFHDFCFNMANDIVSVVASVEYRLAPEHRLPAAYEDAVEALHWIKTNYQSDDWLKNHVDFSSVFLMGSSAGGNIAYNTGLRVEDGDSGISKMIKGLILVQPFFSGIHRMDSELRLVSDSHLSLCNNDMLWELSLPVGANRDHEYCNPTVGDNILRLENIRRLGWSVLVTDCDGDPLVDRSIGLVRFMEKKGVRVMGHFTKGDYHGVQDSEPLKAKELFVVIKKFISSLPNQAIE* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4422 380 SUPERFAMILY alpha/beta-Hydrolases 81 373 IPR029058 -
Tpr2g4422 380 Gene3D alpha/beta hydrolase 64 375 IPR029058 -
Tpr2g4422 380 Pfam alpha/beta hydrolase fold 130 352 IPR013094 GO:0016787
Tpr2g4422 380 PANTHER ARYLACETAMIDE DEACETYLASE 56 373 - -
Tpr2g4422 380 PANTHER CARBOXYLESTERASE 120-RELATED 56 373 - -
Tpr2g4422 380 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 130 146 IPR002168 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4422 Tpr-Chr2 48429425 48430927 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4422 74 371 Carbohydrate Esterase AT1G68620 36.424 2.29e-55 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4422 - - mtr:MTR_6g464120 554.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4422 2 48429425 48430927 Tpr1g0685 1 5804323 5805947 PCT
Tpr1g0686 1 5808644 5810024 Tpr2g4422 2 48429425 48430927 PCT