Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4421 ATGTCTCAAACATCACAACCATCTCAAATAACCGATCCCTACAAACACCTTCATCTTGTTCAAAACCCAAACAACACAATCACACGTTTAAACCAACTTCCACAAACCTCACCTTCATCCGACCCAACACTTCCAATCTCAGTTCTCACAAAAGACATAACAATAAACCAAACAAACAAAACATGGGTTCGATTATTCCTACCAAACAAACCAATTCCAACAAATCATCAAAAACTACCTCTAATTATTTTCTTTCATGGAAGTGGGTTTATACTAGCAAGTGCTGGTTCAACTATGTTTCATGATTTTTGTGTGAAAATGGTTGATGATCTTGGTGTTTTTGTTGTCTCTGTTGAGTATCGTCTTGCACCTGAGCATCGATTGCCGGCGGCGTTTGATGATGCTATGGAAGCACTGTTTTGGATAAGAAATGTTGATGATGATTGGGTGACACGTTATGTTGATTATTCTAAATGTTATATCATGGGGAATAGTGCTGGTGCTACCATAGCCTACAACGCAGGTCTAAGGGCAGTAGAAGTTGTGAAGGATCTTGAGCCACTAAAGATCCAAGGGTTAATATTGCGCCAACCATTCTTTGGTGGGAAAGAGAGAACCAAATCAGAGTTAAAGCTTGAGAATGATCAAGTCATTCCATTGTGTGTTAATGATTTATTGTGGGAGTTAGCACTTCCAATTGGTGTTGACCGTGATCATGAGTATTGCAATCTAACGGTTGGGAATGGTCTTGAAAAGTTTGATAAGATAAGGACCCTTGGATGGAAGGTGTTGATTAGTGGGAATGGTGGAGATCCACTGGTGGATCGTGAGAAAGAATTGGCACAATTGATGGAGGAAGAAGGTGTTCATGTTGTGAAGGATTTTGAGGATGATGGTTCTCATGGTGTAGAGTATTCTGATCCATTGAAAGCTAAGAAATTGATTGAGTTAATTACGGGTTTTATTTCATAA 972 0.392 MSQTSQPSQITDPYKHLHLVQNPNNTITRLNQLPQTSPSSDPTLPISVLTKDITINQTNKTWVRLFLPNKPIPTNHQKLPLIIFFHGSGFILASAGSTMFHDFCVKMVDDLGVFVVSVEYRLAPEHRLPAAFDDAMEALFWIRNVDDDWVTRYVDYSKCYIMGNSAGATIAYNAGLRAVEVVKDLEPLKIQGLILRQPFFGGKERTKSELKLENDQVIPLCVNDLLWELALPIGVDRDHEYCNLTVGNGLEKFDKIRTLGWKVLISGNGGDPLVDREKELAQLMEEEGVHVVKDFEDDGSHGVEYSDPLKAKKLIELITGFIS* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4421 323 PANTHER ARYLACETAMIDE DEACETYLASE 5 322 - -
Tpr2g4421 323 Gene3D alpha/beta hydrolase 14 323 IPR029058 -
Tpr2g4421 323 SUPERFAMILY alpha/beta-Hydrolases 32 322 IPR029058 -
Tpr2g4421 323 PANTHER RECEPTOR GID1, PUTATIVE-RELATED 5 322 - -
Tpr2g4421 323 Pfam alpha/beta hydrolase fold 82 302 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4421 Tpr-Chr2 48425109 48428427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4421 35 242 Carbohydrate Esterase AT1G68620 38.785 1.21e-48 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4421 - - aprc:113866682 457.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4421 2 48425109 48428427 Tpr1g0686 1 5808644 5810024 PCT