Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4416 ATGGGTAAGGAAAGGTATTGGGTTGGAAAATCTTCCAAAAAAAGTGTTATAGTTGAAGAAAATGAAACAAGAACAACAACACCACCTAGTGGTTGCATGTGTGCTATTTTTCAATTCTTTGATTTTCATCCATTTCATTTTCCTAACTCCATAAATCATCAACAAGAAATCACTTCTTGCATCTCAAAACACCACACTACTACTTCTACTACTATTGTCCCAAAAGGTGCTGAAGCTCCTAGGAATAGCTTGGAATCTAATGATGGCATAGTTTCAGCTTCTCTTTCAAAAGAAGAAAATTTTAAAATTCCAATGAATATACAAATTAAAACAAAAAGGAGCAATGGTGGTAATTTGACTGATTTGTCCTCAGAAATAAGCACTTCACCAGGAACAAAGACACCAACTTTAGTTGCAAGATTAATGGGCTTAGAACTTCTTCCAAATTCAAGCTCACCCTCTTTTTCTTCACCTCTTTCAACACCAAATTCTCTAGGGAAGAATAATATTATTCAACATCTTAACCAAGGTAGAACAAACCAACAAAAAATTCAAACCAAAGCAAGAAATAGCATTGATAGTAGTGAAATTACAAGAATACCCTCATCTAGAAAATCAGATTTTTATCATCATAGACTCTCTCTTCAAATCAACAAAGAAAATAATCTTGGTGATGAGGATTTTGAGATACCTAGATTTTCATTTTCAAAGAGGAAAGTTGATGAGAATAATTGCAAAAGTCCAAGTCAACATGCAAAGCAAATTGTTAAACAAGTTGAGGAAAGTGTTGCTAGTAGAAAAGTTGGTCAAGACATTACCAACACTCTCAAAAGCAAGCAGGATATCTGTACTCAACAAAACTTCAGAGTATCGGATAATTTACCAACCAAAGATCAATTACAAGCAAGAGAAGAACTTTTAGGACAATTAAGAATCAAGAAATATCCTAAAACAACAACATTGAAAGATTCAAACCCTTCATCATGTTCACAAAGGATTAGATTCATAGAAAACAAACACAAGCCAAACACAACTTCAAAAGATCAAAACACAAAACCAAAGGCTTATGCATTGAAAGAAGAGCAAGAATCCAGGGACAAGAAATTGGTCCCAAAATGTAAGAAAGATACAAATGAAAAGTTTAGCTCAAGATTCAAAAGGCCACCACAAACATCAGATATAAACATTTGTCCAACATCAAATTCTAGAGCCAATGACATCAAAAGTAATGTCAAAAGCAAGAAAACACAGTCATTATCAAGCAATCTCCTCAACAACATCAATGTTGTCCAAAATGTTCTCTCTATTAAGAGAGTGTCTTCTCCTCTCGCAACCAAAATTCATCAGAAAAAGTCACAGGTATCTGAAACTCAATGTTGTTCGAGCCAAAGGTACAAACAAGAAGGAACAACCACACTCTCAACTCAAGAAACAAGCACCAACGTCATTGAAGACAAATTTAACGGTGTCTCTACCATAGAAACTCACAAAACAGAATTTCAGTACATCACAGAAATCTTAAACAAACATGTCACAACCACAACAACAAAAAATGTGTCTTTTAACACATGGTTCTCTCCAAAACATCCACTTGACCCATCAATCTTCAACCACCTTGAACACAATTTCGACAATAAAGATCGAAACTTTACCACAAAAAATCATTTGGGTCATCGTTGGAATCGAAAATTGATGTTCGATTTGGTGGATGAAGTTTTACAAGAGATTTTGAAGTCAAAGGGTGGTGAAAAAAATCTATGTTTTTCGCAACGGTTTTGTAACCAGTTGACAATTACGGAATTAATGGAGAGAGTTTGGAAAAGGGTAGGAGAGTTTCCATGCGCGAAATGTGACGTTTTGGATGATATCGATAATTTAATCGAATCAGAAGACATGGAAAAATCGATCAAGGATGTAGGTGAAGAAGAAAGTGAAGAGTTGGTGATGGAGATTGAAGGGAGCATATTAGACACATTGATGCATGAAATTTGGTTATGA 1998 0.3473 MGKERYWVGKSSKKSVIVEENETRTTTPPSGCMCAIFQFFDFHPFHFPNSINHQQEITSCISKHHTTTSTTIVPKGAEAPRNSLESNDGIVSASLSKEENFKIPMNIQIKTKRSNGGNLTDLSSEISTSPGTKTPTLVARLMGLELLPNSSSPSFSSPLSTPNSLGKNNIIQHLNQGRTNQQKIQTKARNSIDSSEITRIPSSRKSDFYHHRLSLQINKENNLGDEDFEIPRFSFSKRKVDENNCKSPSQHAKQIVKQVEESVASRKVGQDITNTLKSKQDICTQQNFRVSDNLPTKDQLQAREELLGQLRIKKYPKTTTLKDSNPSSCSQRIRFIENKHKPNTTSKDQNTKPKAYALKEEQESRDKKLVPKCKKDTNEKFSSRFKRPPQTSDINICPTSNSRANDIKSNVKSKKTQSLSSNLLNNINVVQNVLSIKRVSSPLATKIHQKKSQVSETQCCSSQRYKQEGTTTLSTQETSTNVIEDKFNGVSTIETHKTEFQYITEILNKHVTTTTTKNVSFNTWFSPKHPLDPSIFNHLEHNFDNKDRNFTTKNHLGHRWNRKLMFDLVDEVLQEILKSKGGEKNLCFSQRFCNQLTITELMERVWKRVGEFPCAKCDVLDDIDNLIESEDMEKSIKDVGEEESEELVMEIEGSILDTLMHEIWL* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4416 665 Pfam DUF761-associated sequence motif 123 152 IPR032795 -
Tpr2g4416 665 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 663 - -
Tpr2g4416 665 MobiDBLite consensus disorder prediction 174 195 - -
Tpr2g4416 665 Pfam Domain of unknown function (DUF4378) 499 662 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4416 Tpr-Chr2 48317889 48322099 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4416 105 662 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 30.588 3.58e-42 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4416 - - mtr:MTR_6g089530 869.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4416 2 48317889 48322099 Tpr2g4416 2 48317889 48322099 ECH
Tpr2g4416 2 48317889 48322099 Tpr1g0693 1 5881238 5884579 PCT