Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4411 ATGGTGTTATTTGGGATATTAACTTTGTTGGCAATATTAGCTCTCTTTTTATTTTTGAAACTAATATTTTCTTGGTGGATTTCACCAATTTTAAGAAATCGTATGCTTCATAGATGTGGATTTCAAGGGCCACCCCCAAATTTTCCATTTGGAAATGTCCTAGAGATGAAAAAGAAGAATGGTTTTCATTCTTCATTTGGGTCCTCAAAGCTAACCCATGATATACATTCATTTGTTTTCCCCTATTTTTCTAGGTGGCAAAATTCTCATGGGAAAGTTTTCATCTATTGGCTAGGGACAGAACCTTTTCTATACATTGCAGATCCAGAATTCTTGAAGAAAATGTCCACAGAGGTTATAGCAAAAAGATGGGGAAAACCAAATGTGTTTAAAAATGATAGAGAGCCTATGTTTGGAAAGGGTTTGGTGATGGCTGAAGGCAATGAATGGGTTTATCATAGGCATCTTATTGCCCCAACATTTTCTCCTCTCAACTTAAAGGAAATGTCAAGCATGATGGTAGAATCTACAAAGAAAATGATGGATAGATGGATTACTCGAATCAACCCCGGTGGAAACCTCGAAATTGATATCGAAAGAGAGATCTTTGCAACCTCAGGAGAGATCATAGCAAGTACAAGCATGGGTATAGATGATGAAAATGCAAGAACAATTTGTGAAAAATTACGTACCCTAAAAATGAGACTTTTCAAGACAAGATATGTAGGTGTTCCATTTATAGAGTTTATTGACATAAAAAGAACCATAGAAGCAAAGAAACTTGGGAAAGAGATAGATAAGCTTTTGCTTTGTATCATAGAAACTCGAAAGGAATCAAAAGTGGAAAGAAAAGGTAGAGTAGATTTGTTGGATTTGTTGTTGGATGAAAATGAAAACTATGGGAAAAGATTGAGCACAAAACAATTAGTGGATGAATGCAAGACTTTCTTCTTTGCTGGCCTTGACACATCAGCATTGGCTATTTCTTGGACTTTGATGCTTTTAGCTATGAATGAAGATTGGCAAAATCAATTGAGAGATGAGATAAAAGATGTGGTGGGTGATAAAGAAGTTGACATCAATGTGATTGCTGGTTTGAAAAAGATGAAGTGTGTAATGAATGAAGTTCTAAGGCTCTATCCATCAGCACCAAATCTTCAAAGGCAAGCTAGAGAAGACATTAAATTTGGTAATTTAACAATTCCTAATGGGACCAACATGTGGATCGACGTTGTCGCGATGCACCATGACCCATTGTTGTGGGGAGAAAATGTGAATGAGTTTCAACCAGAAAGGTTCATGGGCGATATCAATGGTGGATGCAACCAAAAAATGGGATATTTACCTTTTGGGTTTGGAGGAAGAATGTGTCTTGGTAGAAACTTGAGCTTCATGGAGCATAAAATAGTGTTAACCCTACTTCTCTCTAGATTTAGATTTAAAATGTCCCCAACTTATATCCATTCACCTTCTATTATGCTCTCACTAAGGCCAGCTTATGGACTTCCTCTAATAGTTCAGTCCATTTAG 1530 0.3654 MVLFGILTLLAILALFLFLKLIFSWWISPILRNRMLHRCGFQGPPPNFPFGNVLEMKKKNGFHSSFGSSKLTHDIHSFVFPYFSRWQNSHGKVFIYWLGTEPFLYIADPEFLKKMSTEVIAKRWGKPNVFKNDREPMFGKGLVMAEGNEWVYHRHLIAPTFSPLNLKEMSSMMVESTKKMMDRWITRINPGGNLEIDIEREIFATSGEIIASTSMGIDDENARTICEKLRTLKMRLFKTRYVGVPFIEFIDIKRTIEAKKLGKEIDKLLLCIIETRKESKVERKGRVDLLDLLLDENENYGKRLSTKQLVDECKTFFFAGLDTSALAISWTLMLLAMNEDWQNQLRDEIKDVVGDKEVDINVIAGLKKMKCVMNEVLRLYPSAPNLQRQAREDIKFGNLTIPNGTNMWIDVVAMHHDPLLWGENVNEFQPERFMGDINGGCNQKMGYLPFGFGGRMCLGRNLSFMEHKIVLTLLLSRFRFKMSPTYIHSPSIMLSLRPAYGLPLIVQSI* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4411 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Tpr2g4411 509 Gene3D Cytochrome P450 28 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4411 509 PANTHER CYTOCHROME P450 FAMILY MEMBER 6 504 - -
Tpr2g4411 509 Pfam Cytochrome P450 67 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4411 509 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4411 509 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4411 509 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4411 509 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4411 509 PRINTS E-class P450 group I signature 87 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4411 509 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4411 509 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4411 509 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4411 509 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4411 509 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4411 509 PANTHER CYTOCHROME P450 FAMILY 72 PROTEIN 6 504 - -
Tpr2g4411 509 SUPERFAMILY Cytochrome P450 73 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4411 Tpr-Chr2 48174856 48181860 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4411 2 509 Cytochrome P450 AT5G52400 55.837 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4411 - - gmx:100810679 738.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4411 2 48174856 48181860 Tpr2g4411 2 48174856 48181860 ECH