Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr2g4405 | ATGGCTCCGAAGCAACCAAGTACGGGTCTTTTTGTTGGATTGAACAAAGGTCATATTGTTACCAAGAAGGAATTGGCTCCAAAGCCCTCTAATCGTAAAGGGAAAACAAGCAAGCGTGTGCACTTTGTAAAGAACCTCATTCGTGAGGTTGCTGGCTTTGCACCTTATGAAAAGCGTATCACTGAATTGCTGAAGGTTGGAAAGGATAAGAGGGCACTGAAAGTGGCCAAAAGAAAGCTTGGAACCCATAAACGCGCAAAGAAGAAGCGTGAGGAGATGTCCAACGTTCTCCGAAAGATGAGGGCTGGTGGAGCAGGTGACAAGAAGAAATAA | 333 | 0.4535 | MAPKQPSTGLFVGLNKGHIVTKKELAPKPSNRKGKTSKRVHFVKNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGDKKK* | 111 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr2g4405 | 110 | ProSitePatterns | Ribosomal protein L36e signature. | 55 | 65 | IPR000509 | GO:0003735|GO:0005840|GO:0006412 | |
Tpr2g4405 | 110 | MobiDBLite | consensus disorder prediction | 87 | 110 | - | - | |
Tpr2g4405 | 110 | PANTHER | 60S RIBOSOMAL PROTEIN L36-1-RELATED | 1 | 110 | - | - | |
Tpr2g4405 | 110 | PANTHER | 60S RIBOSOMAL PROTEIN L36 | 1 | 110 | IPR000509 | GO:0003735|GO:0005840|GO:0006412 | |
Tpr2g4405 | 110 | Pfam | Ribosomal protein L36e | 8 | 101 | IPR000509 | GO:0003735|GO:0005840|GO:0006412 | |
Tpr2g4405 | 110 | MobiDBLite | consensus disorder prediction | 79 | 110 | - | - | |
Tpr2g4405 | 110 | Gene3D | 60S ribosomal protein L36 | 1 | 108 | IPR038097 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr2g4405 | Tpr-Chr2 | 48059386 | 48060944 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr2g4405 | 1 | 110 | Cytoplasmic Ribosomal Protein Gene Family | AT3G53740 | 78.182 | 1.77e-57 | 171 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr2g4405 | K02920 | - | zju:107414508 | 213.001 |