LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr2g4405	ATGGCTCCGAAGCAACCAAGTACGGGTCTTTTTGTTGGATTGAACAAAGGTCATATTGTTACCAAGAAGGAATTGGCTCCAAAGCCCTCTAATCGTAAAGGGAAAACAAGCAAGCGTGTGCACTTTGTAAAGAACCTCATTCGTGAGGTTGCTGGCTTTGCACCTTATGAAAAGCGTATCACTGAATTGCTGAAGGTTGGAAAGGATAAGAGGGCACTGAAAGTGGCCAAAAGAAAGCTTGGAACCCATAAACGCGCAAAGAAGAAGCGTGAGGAGATGTCCAACGTTCTCCGAAAGATGAGGGCTGGTGGAGCAGGTGACAAGAAGAAATAA	333	0.4535	MAPKQPSTGLFVGLNKGHIVTKKELAPKPSNRKGKTSKRVHFVKNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGDKKK*	111

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr2g4405	110	ProSitePatterns	Ribosomal protein L36e signature.	55	65	IPR000509	GO:0003735\|GO:0005840\|GO:0006412
	Tpr2g4405	110	MobiDBLite	consensus disorder prediction	87	110	-	-
	Tpr2g4405	110	PANTHER	60S RIBOSOMAL PROTEIN L36-1-RELATED	1	110	-	-
	Tpr2g4405	110	PANTHER	60S RIBOSOMAL PROTEIN L36	1	110	IPR000509	GO:0003735\|GO:0005840\|GO:0006412
	Tpr2g4405	110	Pfam	Ribosomal protein L36e	8	101	IPR000509	GO:0003735\|GO:0005840\|GO:0006412
	Tpr2g4405	110	MobiDBLite	consensus disorder prediction	79	110	-	-
	Tpr2g4405	110	Gene3D	60S ribosomal protein L36	1	108	IPR038097	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr2g4405	Tpr-Chr2	48059386	48060944	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr2g4405	1	110	Cytoplasmic Ribosomal Protein Gene Family	AT3G53740	78.182	1.77e-57	171

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr2g4405	K02920		-	zju:107414508	213.001

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