Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4403 ATGGCAGACACAGCAGTCTCACGCTCAAATTCTGTGAAGGTATTGTTAGACGCGCTTGTTTCAGCTAAAGTCGTCGACAATATCAAGAGCACAAAACTCGACGTTTCACTCTTTAAAAAGCTCAAGACAACACTGCTCAAACTTCAAGTTATACTTACTTATGCTAAAGACAAACGTATCACCACCAACAACCTTACCGTAGGCCTTTGGCTGGAAATTCTGAGGACAAATGCTGTCATTACTCAAATTTACGATTTGTTTGACGAAATCAACATTGAGGCATTGCGCTGCAAAGTGGAAGCACCTGACTATCGGTTTAATAGGATGATTAACTATAAATTGCAAAGATTAATCGAAAGATTAGAGTTCTATTATGAATTGCAAAGATCAATTGAAAGAATAATTGTTTCTAATTCAAGTAGTTATTGGATTGAAATTCTTACTACTACAAGTTTTGATCTAGTTGATGACTCTTCTATACATATACAACTCCTCCCACTCTCAACTTCTGTCAAGGTTTTGTTAGACAGGCTTGTTTCTAGTTTGTTCGTGGATTTCTTCCGGAGCAAGATAGTTGATGATTCATCATTTTTGGATAAGCTGAAGATAAGACTGGCAAGGCTTCAAGATGTACTTAATTATGCTATGCGGAGACATTTCACCGATCCCACCGTCATGGTCCTCATGGAATGGTTTGGTATGCTGCAATATGATGTCTTTGAAGTTGAAACTTTGTTTGACGAAATCAACACTGAGGCATTGCGGCGGTACAAAGGGAAAATCACTCCTACTACTTCTCAGGTGCTAATAAATCTTTCTTCTCCTTTCAAACGGTGGGTGATTAATTCTAAAATGCAAAAATTAATAGAAAGTTTGGAATGCTTGAGTCCAGGTGGACAAAAAGGTGAACTAGATGTTTCCATTGTAATTATACAAAACCTTTCACTTTCAACTTCTGTGAACGCCTTGTTAGACAGGCTTGATTCTGTTGAATTCATAGACAACTTCCGAAGCACGAAACTTGATGTTTCACTCTTGGAAAAGCTTAGGAGAACACTGTTGGTTCTTCATCGTGCTGGGGAGGAACAGGAACATATATTTATTGTGGGACATTGGCTGGATATATTGAGAAATGTTGTCTTTGAAGTTGGCTATTTCTTGGACGAAATCAACCCTGAGGCATTGCATTGCGAAGTCGAAGGAAAGTTGAAACATCTTTCTTCTCCTTCCAATTCTAAATTTCAAAAATTAATTGAAAGATTAGAATTCTTGAGTTCACGAGCACAAGGTCAATTTGGTGGTTCAAGTTCCAGAAGTTTTTGGAATGAATCTCCTAGAAATTCTGTTTTGGATGATGAATCTTCTATTTATGGAAGAGACACTGATATAAAGAAACTTAAACATCTTTTGTTGTCTAGTGATGACGATGATATTAAAATAGGAATTATTTCCATTGTGGGTATTGAAGGGATTGGTAAAACAACACTTGCTAAACTTCTTTACAACGATCCCGAAGTATATGACAAATTTGAGTTAAAATTCTGGGCACATGTCTCAAAACATTTGGATGAATCAATTGTTTTGGAAACCCTTCTTGATGACCGCTATAGAGAAAGAGATGACACAAGTGGCGTAAATAACCGTTACCCAAAGTTTTTACTAGTATTGGATGAGGTAAGGGATACAGGATCTATCAATTGGACATTACTGATGAATATCTGTAATGTTGGCGAAACAGGAAGTAGGATCATCATCACAACACAGGATGAAGGAGTTGCACTATCCGTGCAAACCTTTGCACCATCCATTCAAACCTTTCTTTCTATCCACTACTTGAGACCTCTGGAAAGTGAAGATTGTTGGTCTTTACTTGCGAGACATGCATTTGGAGCATGTAATGACCAACAACAATTCAATCTAGAAGGAATTGGCAGAGAAATTGCAAATAAATGTTTTGGATCACCATTTGCTGCAGTAGCACTTGGGGATATTCTTCGCATCAAATTGTCCCCAGATTACTGGAATGTTGTGCTAGAAAGTGACATTTGGGTATTGACAGATCATGATGTGCAGCCTTTTATTCAATTGAGCTACCATTATCTTTCGACTTCTTTAAAACGATGTTTTGCATATTGTTCAATTTTTCCAAAGAAGTCCATCATAGAAAAAAAAATCGTAGTTCAGTTGTGGATTGCAGAAGGCTTGGTAGAATCGTCCACTAACCTGGAAAAAGTTGGAGAAGAATACTTTGATGTACTAGTATCAAGGTCGTTGATACAACGATCTATTGGTGATGAGGGAGAAAACTATGAAATGCATAACCTCGTCCATGATTTCGCTACAGAGGTTTCTTCTTCATATTGTATCAATATGGACGAACATAACCTTCATGATAGGGTACATAACTTATCATACAATAGAGGGATATTTGACTCATATACTAAATTTGATAAATTGTATGGACTAGAAGGTCTACGTACCTTTCTAGCCTTACCATTACAAGAAAAATTGCCGCTTTGTTTGCTTTCAAACAAGGTAGTACATGACTTGCTGCCAACAATGAAACAATTACGCGCGCTGTCTTTGTCAAACTACAAGAGTATCACTGAGTTACCCAACTCTATTGGAGATTTGTTATACCTGCAGTACTTAAATCTTTCTCACACTGAGATTGAAAAGTTGCCTACTGAAACATGCAAGCTTTACAATCTGCAGTTCTTGTTGTTGGCAGGTTGTAAAAGGCTCATTGAATTGCCGGATGACATTGGGAAGTTGGTTAATCTTCGTCACCTTGATGTTAGTGACACTGCATTGAGGGAGATGCCCGTACAAATAGCCAAACTAGAAAATCTCCAAACTTTGTCTAACTTTGTTGTCAGCAAACACAATCATGGATTGAAGCTTGCGGAGCTGGAAAACTTTCCCCGCCTACATGGAAAACTTTCTATCTCACAGCTACAAAATGTTAATGATCTCTTTGAAGCAGATGAAGCCAATATGAAGATGAAAGATCAGATAGACGAGTTAGCTTTAGAATGGGATTGTGGTAGTAATGTTTCAAATTCACAAACTCAAAGTGTTGTGCTTGAACATTTGCGACCCTCAACAAAATTGAAAAGTCTCACCATCAAAGGCTATGGGGGAATCAACTTTCCAAAGTGGTTGGGTGATTCTTTATTTAGCAACATGGTGTATTTAAGGATCTCAAATTGTGATGATTGTTTATGGCTTCCACCGCTTGGACAATTGGGTAATCTGAAAGAACTCATTATTGAAGGGATGCAATCAATGGAGACAATTAGTATTGACTTCTATGGAAGTGATAGTTCTTCATTTCAACCATTTCCTTCTTTGGAGACTCTACACTTTGAGGATATGCAAGGGTGGGAGGAATGGGACTGGATTGGAGGTACGACTATAGAGTTTCCTAGTCTAAAAACCTTGTCACTAAGTAAGTGCCCACAACTGGGATTAGGAAACATAGCTGACAAATTTCCTTCCTTAACTAGACTTGAGTTAAGAGAATGTCCTCTATTGGTGCAATCAATGCCATCATTAGATCATGCATTCAGCGAAATGATGTTCCCTTTCCATTCTCTTCGGCAGTTGACCATAGACGGCTTTCCATCTCTGACGTCTTTTCCAACAGACGGTCTACCAGAAACATTGAAATTTCTCATAATTAGTAATTGTGAGAATCTAGAGTTCCTTCCTCATGAACTCTTGCACAATTATACATCGCTCGAGGAATTGAAAATATCTTATAGCTGTAATTCAATGATATCATTTACCTTGGGCGCTCTCCCTGTCCTCAAGAGTTTGTTTATTGAGGGTTGTAAAAATTTGAAATCGATATTAATTGCAGAAGGAGCGTCAGAAAAGAGTCTCTCATTTCTTAGAAGCATCAAAATATGGGATTGTAATGAATTGGAGTCATTTCCCCCAGGTGGATTGGCCACTCCAAACCTCGTTTATATTGCAGTGTGGAAGTGTGAGAAGCTTCGTTCATTACCTGAAGCAATGAACACTCTAACTGCCCTTCAAGAAATGGAAATTGATAATCTGCTAAATCTTCAATCTTTTGTTATAGCGGATTTGCCTATCAGTTTAAGGGAATTGACTGTTGGATCTGTTGGAGGGATTTTGCGGAATACTGAGCCAACTTGGATACATCTCAAATGTCTATCAGTGTTGCGAATTAAAGGCGGTGATATGGTGAAAACGTTCGTGGTGCCATTCCTACCTACATTTCTCGTGACACTATGCATTTGTGGTCTTGATGATAAAAACATTGATTGGAAATGGCTTCGACATCTCACTTCTCTCCAAAACCTTGAGATTGTTAACGCTCCCAAACTCAAGTTGTTGCCAAAAAAAGGATTGTCTTCCTCTCTTTTAGTACTAAGTATGACACACTGTCCATTACTGAAAGCAAGTTTGCGGAGAAAGCAAGGGAAAGAGTGGCGTAAGATTGCTCACATTCCCTCCATAATTATAGATGGCGAATTGATCACATGA 4518 0.3818 MADTAVSRSNSVKVLLDALVSAKVVDNIKSTKLDVSLFKKLKTTLLKLQVILTYAKDKRITTNNLTVGLWLEILRTNAVITQIYDLFDEINIEALRCKVEAPDYRFNRMINYKLQRLIERLEFYYELQRSIERIIVSNSSSYWIEILTTTSFDLVDDSSIHIQLLPLSTSVKVLLDRLVSSLFVDFFRSKIVDDSSFLDKLKIRLARLQDVLNYAMRRHFTDPTVMVLMEWFGMLQYDVFEVETLFDEINTEALRRYKGKITPTTSQVLINLSSPFKRWVINSKMQKLIESLECLSPGGQKGELDVSIVIIQNLSLSTSVNALLDRLDSVEFIDNFRSTKLDVSLLEKLRRTLLVLHRAGEEQEHIFIVGHWLDILRNVVFEVGYFLDEINPEALHCEVEGKLKHLSSPSNSKFQKLIERLEFLSSRAQGQFGGSSSRSFWNESPRNSVLDDESSIYGRDTDIKKLKHLLLSSDDDDIKIGIISIVGIEGIGKTTLAKLLYNDPEVYDKFELKFWAHVSKHLDESIVLETLLDDRYRERDDTSGVNNRYPKFLLVLDEVRDTGSINWTLLMNICNVGETGSRIIITTQDEGVALSVQTFAPSIQTFLSIHYLRPLESEDCWSLLARHAFGACNDQQQFNLEGIGREIANKCFGSPFAAVALGDILRIKLSPDYWNVVLESDIWVLTDHDVQPFIQLSYHYLSTSLKRCFAYCSIFPKKSIIEKKIVVQLWIAEGLVESSTNLEKVGEEYFDVLVSRSLIQRSIGDEGENYEMHNLVHDFATEVSSSYCINMDEHNLHDRVHNLSYNRGIFDSYTKFDKLYGLEGLRTFLALPLQEKLPLCLLSNKVVHDLLPTMKQLRALSLSNYKSITELPNSIGDLLYLQYLNLSHTEIEKLPTETCKLYNLQFLLLAGCKRLIELPDDIGKLVNLRHLDVSDTALREMPVQIAKLENLQTLSNFVVSKHNHGLKLAELENFPRLHGKLSISQLQNVNDLFEADEANMKMKDQIDELALEWDCGSNVSNSQTQSVVLEHLRPSTKLKSLTIKGYGGINFPKWLGDSLFSNMVYLRISNCDDCLWLPPLGQLGNLKELIIEGMQSMETISIDFYGSDSSSFQPFPSLETLHFEDMQGWEEWDWIGGTTIEFPSLKTLSLSKCPQLGLGNIADKFPSLTRLELRECPLLVQSMPSLDHAFSEMMFPFHSLRQLTIDGFPSLTSFPTDGLPETLKFLIISNCENLEFLPHELLHNYTSLEELKISYSCNSMISFTLGALPVLKSLFIEGCKNLKSILIAEGASEKSLSFLRSIKIWDCNELESFPPGGLATPNLVYIAVWKCEKLRSLPEAMNTLTALQEMEIDNLLNLQSFVIADLPISLRELTVGSVGGILRNTEPTWIHLKCLSVLRIKGGDMVKTFVVPFLPTFLVTLCICGLDDKNIDWKWLRHLTSLQNLEIVNAPKLKLLPKKGLSSSLLVLSMTHCPLLKASLRRKQGKEWRKIAHIPSIIIDGELIT* 1506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4403 1505 Coils Coil 198 218 - -
Tpr2g4403 1505 Gene3D - 439 601 IPR027417 -
Tpr2g4403 1505 PANTHER OS05G0414200 PROTEIN 335 1237 - -
Tpr2g4403 1505 SUPERFAMILY L domain-like 1192 1476 - -
Tpr2g4403 1505 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 438 712 IPR027417 -
Tpr2g4403 1505 SUPERFAMILY L domain-like 772 1239 - -
Tpr2g4403 1505 Pfam NB-ARC domain 460 679 IPR002182 GO:0043531
Tpr2g4403 1505 Gene3D Ribonuclease Inhibitor 834 1186 IPR032675 -
Tpr2g4403 1505 PANTHER DISEASE RESISTANCE PROTEIN RP 335 1237 IPR044974 GO:0006952
Tpr2g4403 1505 Gene3D - 698 783 IPR036388 -
Tpr2g4403 1505 PRINTS Disease resistance protein signature 482 497 - -
Tpr2g4403 1505 PRINTS Disease resistance protein signature 546 560 - -
Tpr2g4403 1505 PRINTS Disease resistance protein signature 651 665 - -
Tpr2g4403 1505 PRINTS Disease resistance protein signature 1140 1156 - -
Tpr2g4403 1505 Gene3D - 614 697 IPR042197 -
Tpr2g4403 1505 Gene3D Ribonuclease Inhibitor 1218 1378 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4403 Tpr-Chr2 48037540 48043966 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4403 868 963 WRKY Transcription Factor Family AT4G12020 39.175 1.89e-08 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4403 - - mtr:MTR_0603s0010 1650.95