Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4400 ATGCCACTGCCAGTTGCAAAACTCAAGGCCTCTGACACTCCAGATGTCATGCGAACAGAAGACGGAATAGATACCATAATCAGACAAGCAATTGGCAAAGATTCTTTATTGTATATTCCAAGGGCCAATGAAAACCCAGGACAGTTGATTCAATTACTTAGTGCTTTTGATCAGCTAGGTGTTACCAATGTTTATTCAGAATATCCAGGGTGGCCTTTGCTCTATCCTCTGAAGGCTCCATCAGACAAATGTGAGAAATGTTCTCAAGAGTTTTGCTCCACCATTAACTATAGAAGACATTTACCTGTACATCACCGATTCAAAAAGCTTGATAAGGATACTTCCAAAACCAGGGATCTTTTAGGGGCATATTGGGATAAGCTCTCTGTAGAAGAGGCGAAGGAAGTTCTATCTTTCGAAAATGTGATGCTGGAGGAAGTTCCAGGGTCTTCGATTTTGAATGCTTTGGTGACTCTTAATCAAAAACAAGGATTTTTTTTACTTCCGCAATGTTATATGAGGGCTGGTGTTGCCCTATTGGATATTCTTCAATCCAACCCTTCCAGTTTTCCTATACCTTCCCGGGAATTGTTCAGTATCCTAGATGATGCTAGTGAAAGAACATTTTTATTGGGGACAGCAGTGTCAATGCAAAAACATGTTTTTCATGGAGGGGCTGGAAAAATTGGACTTCAACCCAAAAACACAGTTGCTTGCATAAGCTTCTTGCTAGAACAAATATTGGTTAAGGCATGGCTTGCTGACAAGGATGCTGAAGCACTGAGGTGCCAGAAACAATTGGTGGAGGAGGAAGAAGCTGCTCAGAAAAGACAAGCTGAGATTTTGATGAGGAAACGCCAGAAAAAGCTTAGACAAAAAGAGCACCGGGCTAGGGAACAAAGAGACAAGCTTGAGGAAGAAACTAAAGGGAGTGTTGACAGTACACTGAAGACTCTGTCACCAGCAGAAAGTTTTTTGGATACATGTGATTTTGAAGCTCAAAATCCAGAGGAGTTTGCAAATAACACTCCTTCACATGTACCTATTCAATTCCCTGATGTCAATGAAGGAAAAGATGGGGATACTCCGTCTGGACTTGCTTTTGGCTCTCATCAGATTATTGGACAGTCAGAATGTGGACTTGATCATCCGTGCAGAGCAGTTGCAAGATGGCAGGAGCCTCCAAAATCCCCCCAACGCACGGTAGTCAGTGATCTACATACACACGAGAATCCTCCAATTTTAAAGCCTGAAGTCATTCAGAGATATGGAACCTGCAATGATCATAGGGAAGATGCTATGGTTAATGCTGGTAAAGCATGGAATAGTAAGCCAAAACCTGAAATTGACATAGCAAAGACTGAACCAGACCCAGTTAATAATCATGAAGTTTTGATCGGATCTATATCCGTCAATCTAGGAAAATGCAGCCAATCAGAGGGTAATGTGGTGGCATCTCAAGAAGACTGCTCGGTTGAGAATGTGGATGACCAGAATAGTTCTCAGGATAAACCAAAGAAACCTGATTTAGTCAAGAATGGAAACAATCAAGCAACAGTTAAGACTTCAACACCAGTTAGTCAGTTTGAAACTAAGGATTCAGTTCCAGTTCAAAGTCATGGGACAGAAGTTGATGCAGGTAGTAGAGATGAAGGTTGTCAAAACTTGTCAAGGTTGGCTAGTGATGGTAGCGATGTTGGTTTTAAAAACAAAATCTCCAATCTCGAGGGTCACGTAGATCCAGGGAAGTTCCAGTTTAACATCCAGGCTGCAAAAGCCTTTCTTGCACAAAGATGGGAAGAAGCTATATCATCAAATCATGTGAAATTGGTTATTTCTTATGACTCTGAACCTCCTGGGAGCCGGGAGATACAGGATTTGAAGGTAGCAGCAGCATGTGAAGCTTCTGATGGTGATGATGGATGCAGCAACATTCCAGCAAAAGCAGTTAACAAGTTGCTTTCAACTACCAAAGCTTCTAAGTCCAAACGCAGAGGGAGGTCTAAAAAGGGAACCGATTACAAGAATATTCCCAAAGAGAAAACAACCTAA 2052 0.4176 MPLPVAKLKASDTPDVMRTEDGIDTIIRQAIGKDSLLYIPRANENPGQLIQLLSAFDQLGVTNVYSEYPGWPLLYPLKAPSDKCEKCSQEFCSTINYRRHLPVHHRFKKLDKDTSKTRDLLGAYWDKLSVEEAKEVLSFENVMLEEVPGSSILNALVTLNQKQGFFLLPQCYMRAGVALLDILQSNPSSFPIPSRELFSILDDASERTFLLGTAVSMQKHVFHGGAGKIGLQPKNTVACISFLLEQILVKAWLADKDAEALRCQKQLVEEEEAAQKRQAEILMRKRQKKLRQKEHRAREQRDKLEEETKGSVDSTLKTLSPAESFLDTCDFEAQNPEEFANNTPSHVPIQFPDVNEGKDGDTPSGLAFGSHQIIGQSECGLDHPCRAVARWQEPPKSPQRTVVSDLHTHENPPILKPEVIQRYGTCNDHREDAMVNAGKAWNSKPKPEIDIAKTEPDPVNNHEVLIGSISVNLGKCSQSEGNVVASQEDCSVENVDDQNSSQDKPKKPDLVKNGNNQATVKTSTPVSQFETKDSVPVQSHGTEVDAGSRDEGCQNLSRLASDGSDVGFKNKISNLEGHVDPGKFQFNIQAAKAFLAQRWEEAISSNHVKLVISYDSEPPGSREIQDLKVAAACEASDGDDGCSNIPAKAVNKLLSTTKASKSKRRGRSKKGTDYKNIPKEKTT* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4400 683 Coils Coil 258 278 - -
Tpr2g4400 683 MobiDBLite consensus disorder prediction 295 312 - -
Tpr2g4400 683 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 4 682 - -
Tpr2g4400 683 MobiDBLite consensus disorder prediction 655 683 - -
Tpr2g4400 683 MobiDBLite consensus disorder prediction 486 551 - -
Tpr2g4400 683 ProSiteProfiles Zinc finger C2H2 type domain profile. 82 109 IPR013087 -
Tpr2g4400 683 MobiDBLite consensus disorder prediction 512 538 - -
Tpr2g4400 683 MobiDBLite consensus disorder prediction 285 315 - -
Tpr2g4400 683 Coils Coil 283 310 - -
Tpr2g4400 683 ProSitePatterns Zinc finger C2H2 type domain signature. 84 105 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4400 Tpr-Chr2 47990730 48002665 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4400 21 681 C2H2 Transcription Factor Family AT4G25610 37.387 3.09e-113 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4400 - - mtr:MTR_6g053660 918.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4400 2 47990730 48002665 Tpr1g0766 1 6466812 6473676 PCT