Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4358 ATGTTAACTTTTCTAAATGGAACCTTCTTATTTTGGTTCCTTACACTCATCATCATCATCATCTTACTATGTTCATTACCAATATGGAATTCAAACCCTTCAATCAACAAAAACTCACCACCTTCTCCTCCAAAACTTCCAATACTAGGAAATCTCCATCAACTAGCCACTTTGACTCACTACAAACTCAAATCCTTAGCTCAAATCTATGGTCCCTTAATGTTACTTCACTTTGGCAATGTTCCAATTCTTGTTGTCTCAAATTCTAAAGCTGCATGTGAAATCCTCAAAACATATGACCTTGTTTTTTGTAATAGACCACATAGAAAGATGTTTGATATCTTTTGGTATGGTTCTAAAGATATAGCATCAGCTCCTTATGGTCACTATTGGAGACAAATAAGAAGTATATGTGTTTTGCATCTTCTTAGTGCCAAAAAGGTTCAATCTTTTTGTGTAGTAAGAGAAGAGGAAAGTGTAATAATGATTGAAAAGATTAGAAAGTGGTGTTCTAATTCTTTGTTGCAACCAATGAACTTAACTAATTTGTTATGTGAAACAACTAATGATATTGTGTGTAGAGCTACACTTGGAAAGAGATATAGTGATGAAGGTGAGGGAAAACTTAGAGAAGCAGTGGCTGAGTTGGAAGTTTTGTTAGGTACTTGTGTTTTAGGGGATTATGTACCTTGGCTTGATTGGTTGGGAAAAGTTAATGGTTTGTATGGTAGAGCAAAAAGAGTTGCTAAGGTGTTTGATGAGTTTTTGGATCAAGTTGTTGAAGAGCATGTTAGTGATTGGTTGGAGAAAAGTAAAAAGGGACTTGGTGATTTTGATAATCAAGAACATAATGATTTTGTGGATGTTTTGCTTTGGATCCAAAGGGCAAATGCCACTGGATTTGAGATTGATAGGACAATAATCAAGGCCTTGATCATGGATATGTTTGGTGCAGGTACAGATACTACCCTTGCAGTCTTAGAATGGACAATGACAGAACTTTTAAGGCACCCAAATGTGATGCAAAAACTACAAAATGAGATAAGAAATGTGGTTAGCCAAAAAGGTCACATAACTGAGCAAGATTTGTACAACATGCATTACTTGAAAGCAGTAATTAAAGAAACTCTTAGACTACACCCACCATCACCATTATTAATTCCTAGGGAATCAAGGCAAGACACAAAAATTATGGGCTATGACATTGCAGCTGGAACACAAGTAATAGTTAATGCATTTGCAATTTCAACAGATTCTTCTTATTGGGATCAACCTCTAGAATTTCAACCTGAGAGATTCTTGAAAAATGTAGATATTAATGGAAATGATTTTCAATTGATCCCATTTGGAGCTGGAAGGAGGGGTTGTCCTGGAATAAGTTTTGCTATGGTTGTGAATGAGTTGGTTTTAGCTAATCTTGTTCATCAATTTGATTGGTCATTGCCTAATGGAGTGGAGAGGGATATGGCTTTGAATATGTCTGAAACTACTGGGTTAACAATTCATAGAAAATTTCCCCTTATGGCTATTGCATCTCCACATTTATAA 1548 0.3553 MLTFLNGTFLFWFLTLIIIIILLCSLPIWNSNPSINKNSPPSPPKLPILGNLHQLATLTHYKLKSLAQIYGPLMLLHFGNVPILVVSNSKAACEILKTYDLVFCNRPHRKMFDIFWYGSKDIASAPYGHYWRQIRSICVLHLLSAKKVQSFCVVREEESVIMIEKIRKWCSNSLLQPMNLTNLLCETTNDIVCRATLGKRYSDEGEGKLREAVAELEVLLGTCVLGDYVPWLDWLGKVNGLYGRAKRVAKVFDEFLDQVVEEHVSDWLEKSKKGLGDFDNQEHNDFVDVLLWIQRANATGFEIDRTIIKALIMDMFGAGTDTTLAVLEWTMTELLRHPNVMQKLQNEIRNVVSQKGHITEQDLYNMHYLKAVIKETLRLHPPSPLLIPRESRQDTKIMGYDIAAGTQVIVNAFAISTDSSYWDQPLEFQPERFLKNVDINGNDFQLIPFGAGRRGCPGISFAMVVNELVLANLVHQFDWSLPNGVERDMALNMSETTGLTIHRKFPLMAIASPHL* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4358 515 PANTHER CYTOCHROME P450 71B11-RELATED 15 512 - -
Tpr2g4358 515 Coils Coil 341 361 - -
Tpr2g4358 515 Pfam Cytochrome P450 40 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4358 515 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4358 515 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4358 515 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4358 515 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4358 515 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4358 515 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4358 515 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4358 515 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4358 515 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4358 515 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4358 515 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4358 515 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4358 515 PANTHER CYTOCHROME P450 FAMILY PROTEIN 15 512 - -
Tpr2g4358 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Tpr2g4358 515 Gene3D Cytochrome P450 29 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g4358 515 SUPERFAMILY Cytochrome P450 40 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4358 Tpr-Chr2 47380246 47383895 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4358 16 512 Cytochrome P450 AT3G48270 48.814 3.18e-170 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4358 - - gmx:100813357 668.692