Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4351 ATGGTGACGATGAACGAAGAAGCTATGGAAAATCCAATCACATGCAGCAGTTGTGAGGAAAAGCAGCTTAGAGCTGAAAATGCTCGACTGAAGAAGAAACTGGCTCGAGTGTGTGCCTTAGATGCTATGAAGGAACTAATCAAGTTGGCAGAACCAGATTCCATTCTCTGGATCAAGAGTCCAGACAACGAGAAAGAAGTGTTTAATCACGACGAGTATGAACGGAGGCGTTCTTCTTTTAACTCTCCGAAACCAAATGGTTTTGTAACTGAAGCTACAAGAGAGACTGTGCTGTTATGCACCAACACTGCTGCACTGATTGAAACATTTCTTGATGCGGATCGATGGGCGGAGATGTTTCCGTCTATGATTGTTGGAGCTGAAACATTGGATGTATTATCTAATGGAATTGATGGAACCAGAAATGGATCTATGCAACTGATGCATGCTGAGATTCAATTGCCTACTCCTTTGGTGCCGGTTCGAGAATACAAATTCATCAGGTTTTGCAAGCAGCATGCTGATGGTAAATGGGCTGTCGTTGATTTTTCGTTCGACTTTGGTCGTAATTGTCCCAATGGAGACCCTAACATGAGCTGTAAGAAGCTTCCCTCTGGCTGTATTTTGCAGGACATGCCCAATGGTTTTTGCAAGATAACTTGGGTGGATCATTCTCAATATGATGAGAGTCCTGTCCACCAAATCTATCGTCCATTGGTTAACTCCGGCATGGCATTTGGTGCTCATAGATGGGTTGCAACTCTCAAGAGGCACTGTGAATCCCATGCCATCCTCATGTCTGCCGTACCGTCTCAAGACCCTGAAGTCATATGCCCATCTGGCAAGAGAACCATGTCAAAGCTTGCGCAGCATATGTCCGATTACTTCTGGTCTGGAATTTGTCCTTCGTCGGCTTCCCAATGGGACATCCTTCCCATTAATAACTTGCGCAATGGCGACATAAGATTCATGTCCCGTTTAATTCAGGATGCCTCTGGCGAAAATCGTAGCATTGTGCTAAGTGCTTCAACTTCTGTTTGGATGCCGGTGTCGCGGAAAATGGTGTTTGATTTCCTCTGTGATGCACAAATGAGAGGTGAATGGGATGTTTTGTCCAATGGTGAGCATGAGATGGTCCACATTGCTAAAGGAGAAGAAATTGGAAATTCAATTTCTATCCTTGCTAATTCGGGCAACATGCTATATCTACAAGATTCATGGACCGATAGTTTTGGCTCGATGATCGTGTATTCTCCGATCAGCATGCAATCCTTGAGCATGCTTTTGAATGGTGGAGATCCTTCATCTGTTCCTCTTTTTCCTTCTGGCTTTTCAATTCTTCCGGATGGCCATTCAAGTAACAACACCATCATCGAAACTTCAAGTGACGGTAGTGGCAGCGACAACGACGACAACAACAACAACAACGGATGCTTGCTCACATTTGGATTACAATTACAAATTTTACTGGATAGCCAGCCAACAAGTAAGTTCGCATATGAATCAGTTGAAAGCATTAATGAACTCATCTCATGCACCATTAAGAAGGTCAAAGAGGCTCTTGGAGTTGAATGA 1575 0.4387 MVTMNEEAMENPITCSSCEEKQLRAENARLKKKLARVCALDAMKELIKLAEPDSILWIKSPDNEKEVFNHDEYERRRSSFNSPKPNGFVTEATRETVLLCTNTAALIETFLDADRWAEMFPSMIVGAETLDVLSNGIDGTRNGSMQLMHAEIQLPTPLVPVREYKFIRFCKQHADGKWAVVDFSFDFGRNCPNGDPNMSCKKLPSGCILQDMPNGFCKITWVDHSQYDESPVHQIYRPLVNSGMAFGAHRWVATLKRHCESHAILMSAVPSQDPEVICPSGKRTMSKLAQHMSDYFWSGICPSSASQWDILPINNLRNGDIRFMSRLIQDASGENRSIVLSASTSVWMPVSRKMVFDFLCDAQMRGEWDVLSNGEHEMVHIAKGEEIGNSISILANSGNMLYLQDSWTDSFGSMIVYSPISMQSLSMLLNGGDPSSVPLFPSGFSILPDGHSSNNTIIETSSDGSGSDNDDNNNNNGCLLTFGLQLQILLDSQPTSKFAYESVESINELISCTIKKVKEALGVE* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4351 524 SMART START_1 37 261 IPR002913 GO:0008289
Tpr2g4351 524 SUPERFAMILY Bet v1-like 289 482 - -
Tpr2g4351 524 Gene3D - 39 267 IPR023393 -
Tpr2g4351 524 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 39 522 IPR042160 -
Tpr2g4351 524 CDD START_ArGLABRA2_like 38 260 - -
Tpr2g4351 524 Pfam START domain 39 261 IPR002913 GO:0008289
Tpr2g4351 524 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 39 522 - -
Tpr2g4351 524 ProSiteProfiles START domain profile. 28 264 IPR002913 GO:0008289
Tpr2g4351 524 SUPERFAMILY Bet v1-like 39 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4351 Tpr-Chr2 47297967 47301165 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4351 39 521 Homeobox Transcription Factor Family AT3G61150 46.667 1.30e-156 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4351 K09338 - gmx:100794400 531.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g0717 1 6072669 6078600 Tpr2g4351 2 47297967 47301165 ECH
Tpr2g1455 2 17133818 17140372 Tpr2g4351 2 47297967 47301165 ECH
Tpr2g4351 2 47297967 47301165 Tpr2g4351 2 47297967 47301165 ECH