Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4348 ATGAACTTTCTCCGGCGACTCTTCGGCGGTAAAAAACACCGCAATCAACCACAAGAATCCACCAAAACCACCGCAAAAAAAGACAAAAGAAGCTGGAGTTTCGCAAAGAACAACACAAGAGACAAAACAAACTCACACACATTACATAACAACAAAAATTCTTCTGACCCTTCTTCTTCTCCTTTCGCCGGAAATTACGATGCCAATAAACATGCCATTGCTGTTGCTGCTGCTACTGCTGCCGTTGCTGAGGCCGCACTTGCTGCTGCTCATGCTGCTGCTGAGGTTGTTAGATTGACTAGTAACACCGGAGCTGGAAAAAATGCAACTCCGGTGCTTCACCGGAGATGGTTGCAAGAGGAAATTGATGCTGCCGGGAAGATACAGTCGGCGTTCCGAGGTTACTTGGCAAGGAGGGCATTAAGAGCACTTAAAGCATTGGTGAAGTTGCAAGCATTGGTGAGAGGTCACATTGTAAGAAAACAAACAGCTGATATGCTAAGACGCATGCAAACATTGGTGCGACTTCAGTCTCGAGCACGTGCAAGTCGAGTGCCCATTTCCGATAACAATACGCACTCTTTCAAGTCTCCACTTTCTTATTATCCTGTCCCTGATGATTATGATCACCCACTTCGTGTCTATAGTACAAAATTTGACGGATCTTCCATCCTCAAGAGATGTAGTTCCAATGCAAATTTTAGAGACATGAACTTAGAACGAGCCCGGTTTGGTTCGAATTGGTTAGACGGTTGGATGGAAGAAAACTCATGGAACCAAACCGGCGACGCTTCATTGAAAAAAGTACAATTTGATGATGAAAAGAGTGACAAAATTCTTGAAGTAGATACATGGAAGCCAAATTTGAACTCACATCATAGTACTAGCACATCTTTTCAGCATCATTATTCATCTTGTGATTACAATAGTGAGAATTTTATGGTACACGAGTCACCGTCGAAACGTTTGTCTAAACCTCACAATCCAAGTCTTTCTTCTATGAAACATCATAAAGGAAAAGAAGAAGTAGCTTCTTCACGAACAGCCGAGAATAGTCCGCAGGCATTTTCGGCTTCGTCGAGAATTGAAAGTGTTTCAAGGAGAGGTCCTTTTACACCTACTAAAAGTGAGTGCTCATGGGGTGTTTTTAGTGGTTACTCTGGCTATCCTAGTTACATGGCAAATACTCAATCTTCTAGGGCTAAGGTTAGGTCACAAAGTGCTCCAAGACAAAGGCTAGAGTTTGAGAGATGTGGTTCAACTACTAGGTCTATTCAAGGTCTTTGGGAATCAGGGTCTAATTCAGATAAGGATTTTGATTTTAAGAGCAAGGTTTATCCAACCACAAGTAGCTTGAACGGAATTGGGAGTACAAATTTAAGGTGA 1386 0.425 MNFLRRLFGGKKHRNQPQESTKTTAKKDKRSWSFAKNNTRDKTNSHTLHNNKNSSDPSSSPFAGNYDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSNTGAGKNATPVLHRRWLQEEIDAAGKIQSAFRGYLARRALRALKALVKLQALVRGHIVRKQTADMLRRMQTLVRLQSRARASRVPISDNNTHSFKSPLSYYPVPDDYDHPLRVYSTKFDGSSILKRCSSNANFRDMNLERARFGSNWLDGWMEENSWNQTGDASLKKVQFDDEKSDKILEVDTWKPNLNSHHSTSTSFQHHYSSCDYNSENFMVHESPSKRLSKPHNPSLSSMKHHKGKEEVASSRTAENSPQAFSASSRIESVSRRGPFTPTKSECSWGVFSGYSGYPSYMANTQSSRAKVRSQSAPRQRLEFERCGSTTRSIQGLWESGSNSDKDFDFKSKVYPTTSSLNGIGSTNLR* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4348 461 Pfam Protein of unknown function (DUF4005) 352 414 IPR025064 -
Tpr2g4348 461 Pfam IQ calmodulin-binding motif 127 142 IPR000048 GO:0005515
Tpr2g4348 461 Pfam IQ calmodulin-binding motif 145 162 IPR000048 GO:0005515
Tpr2g4348 461 PANTHER CALMODULIN-BINDING PROTEIN 1 459 - -
Tpr2g4348 461 MobiDBLite consensus disorder prediction 318 361 - -
Tpr2g4348 461 ProSiteProfiles IQ motif profile. 121 149 IPR000048 GO:0005515
Tpr2g4348 461 ProSiteProfiles IQ motif profile. 145 172 IPR000048 GO:0005515
Tpr2g4348 461 PANTHER IQ-DOMAIN 5-RELATED 1 459 - -
Tpr2g4348 461 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 112 166 IPR027417 -
Tpr2g4348 461 Gene3D - 122 164 - -
Tpr2g4348 461 MobiDBLite consensus disorder prediction 1 59 - -
Tpr2g4348 461 MobiDBLite consensus disorder prediction 12 47 - -
Tpr2g4348 461 MobiDBLite consensus disorder prediction 346 361 - -
Tpr2g4348 461 SMART iq_5 143 164 IPR000048 GO:0005515
Tpr2g4348 461 SMART iq_5 120 142 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4348 Tpr-Chr2 47253767 47260665 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4348 1 429 IQD Protein Family AT5G62070 46.067 1.19e-61 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4348 - - gmx:100785181 550.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4348 2 47253767 47260665 Tpr2g4348 2 47253767 47260665 ECH