Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4346 ATGGAAAATGGAGCTATGGAAACTGCACCAACTTCTGAAATGATCGGAAATGATACCGAGAACGAGAGATCTAAGCTTATAGATCTTGCATCAGCTGCTATAGATGAAGTTATCAAGTTGGCTCAACCTGACTCCGATCTTTGGATCAAGTCTCTGGAGAGTGGGAGGGTTGGGAGGGAAGTTCTCAACCGCGACGAGTACGAAAAGATTCGTTCTCCTTTTGATACTCCGAAACCAAATGGTTTTGTAGCTGAAGCTTCAAGAAAGACTGTGCTATTATGCACCAACACTGCTGCACTGATCGAAACATTTCTTGATGCGGATCGGTGGTCGAAGATGTTTTCATATATAATTGCTAAAGCTAAAACATTAGATGTATTATCTAATGGAATTAATGGAACCAGAAATGGATCTATGCAACTGATGCATGCTGAGATTCAATTGCCTACTCCGTTGGTGCCGGTTCGAGAATATAGATTCATCAGGTTTTGCAAGCAGCATGCTGAAGGTAATAAGTGGGCTGTTGTTGATGTTCCGATCGACTTTTATCGTGATGGTCCCAATGGAAACCCTAACTTGAGCTGTAAGAGGCTTCCGTCTGGATGTATTTTGGAGGATATGCCTTATGGTTGCCAGATAACTTGGGTGGATCATTCTCAATATGATGAGAGTGCTGTCCACCAAATCTACCGTCCATTGGTTAACTCCGGCATCGCATTTGGTGCTCATAGATGGGTTGCAACTCTCAAGAGGCATTGTGAATCTCTTGCCATCCCAATGTTTACCGTACCATCTGATTACCCTGCAGCTATAAGCCCATCTGGCAAGAGTGGCTTTTTAATGCTCGCGCAGCGGATGTCTGATAGCTTCATGTCCGGAATTTGTCCTTCGTCAGCTTGCAAGTGGGACATCCTTCACATTAGTAACATGGCCAACAACGACAGGAGAATCATGTCCCGGTTAATTCAGGATGCCTCTGGTGAAAATCGTGCAATCGTGCTAAGTGCTTCAACTTCTGTTTGGATGCCGGTGTCACGGCAAAAGATGTTTTATTTCCTCCGTGATGCACGAATGAGAGGTCGGTGGGATGGTTTGTCCAACAGCGAATCAATGGAGGAGATAGTCCGCATTCCTAAAGGACAATTTGGAGATTCAGTTTCTATCATTGGTGCTGCTGCTGGTAAAGGAAACAAGAGCAACTTTCTATATCTACAAGATTCATGGATCGATAGCTCTGGCGCAATGGTCATATATTCTCCGATTAGTATGGAATCCTACAACATGGTGATGAGTAATGGTGAAGATGCTTCATTTATTCCGGTTTTGCCTTCCGGCTTTTCAATTCTTCCAGATGGCAATTCAAGTAACAAAACAATGGTCAGAAGTGACGGTAGTGGCAGCAGTGGCAGCGGTGGCAACATCGGATGCTTGCTCACGGTTGGATTACAAATGTTGCTGATCAGCAGCCGTCAATCAAGCAAGCTGACAAATGAATCAATTGTTACCGTTAATGAAATCATCTCATGCACTATTCAGAAGATCAAGAACGCTCTTGGAGTTGCATGA 1566 0.44 MENGAMETAPTSEMIGNDTENERSKLIDLASAAIDEVIKLAQPDSDLWIKSLESGRVGREVLNRDEYEKIRSPFDTPKPNGFVAEASRKTVLLCTNTAALIETFLDADRWSKMFSYIIAKAKTLDVLSNGINGTRNGSMQLMHAEIQLPTPLVPVREYRFIRFCKQHAEGNKWAVVDVPIDFYRDGPNGNPNLSCKRLPSGCILEDMPYGCQITWVDHSQYDESAVHQIYRPLVNSGIAFGAHRWVATLKRHCESLAIPMFTVPSDYPAAISPSGKSGFLMLAQRMSDSFMSGICPSSACKWDILHISNMANNDRRIMSRLIQDASGENRAIVLSASTSVWMPVSRQKMFYFLRDARMRGRWDGLSNSESMEEIVRIPKGQFGDSVSIIGAAAGKGNKSNFLYLQDSWIDSSGAMVIYSPISMESYNMVMSNGEDASFIPVLPSGFSILPDGNSSNKTMVRSDGSGSSGSGGNIGCLLTVGLQMLLISSRQSSKLTNESIVTVNEIISCTIQKIKNALGVA* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4346 521 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 10 519 IPR042160 -
Tpr2g4346 521 CDD START_ArGLABRA2_like 23 254 - -
Tpr2g4346 521 SMART START_1 28 255 IPR002913 GO:0008289
Tpr2g4346 521 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 10 519 - -
Tpr2g4346 521 ProSiteProfiles START domain profile. 19 258 IPR002913 GO:0008289
Tpr2g4346 521 SUPERFAMILY Bet v1-like 21 256 - -
Tpr2g4346 521 Pfam START domain 29 255 IPR002913 GO:0008289
Tpr2g4346 521 SUPERFAMILY Bet v1-like 298 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4346 Tpr-Chr2 47205144 47208576 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4346 21 518 Homeobox Transcription Factor Family AT3G61150 46.139 5.45e-152 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4346 K09338 - gmx:100785102 526.168