Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4343 ATGGAAAATGGAGCTATGGAAACTGCACCAACTTCTGAAATGATCGGAAATGATACCGAGAACGAGAGATCTAAGCTTATAGATCTTGCATCAGCTGCTATAGATGAAGTTATCAAGTTGGCTCAACCTGACTCCGATCTTTGGATCAAGTCTCTGGAGAGTGGGAGGGAAGTTCTCAACCGCGACGAGTACGAAAAGATTCGTTCTCCTATTGATACTCCGAAACCAAATGGTTTTGTAGCTGAAGCTTCAAGAAATACTGTGCTATTATGCACCAACACTGCTGCACTGATCGAAACATTTCTTGATGCGGATCGGTGGTCGAAGATGTTTTCATATATAATTGCTAAAGCTAAAACATTAGATGTATTATCTAATGGAATTAATGGAACCAGAAATGGATCTATGCAACTGATGCATGCTGAGATTCAATTGCCTACTCCGTTGGTGCCGGTTCGAGAATATAGATTCATCAGGTTTTGCAAGCAGCATGCTGAAGGTAATAAGTGGGCTGTTGTTGATGTTCCGATCGACTTTTATCGTGATGGTCCCAATGGAAACCCTAACTTGAGCTGTAAGAGGCTTCCGTCTGGATGTATTTTGGAGGATATGCCTTATGGTTGCCAGATAACTTGGGTGGATCATTCTCAATATGATGAGAGTGCTGTCCACCAAATCTACCGTCCACTGGTTAACTCCGGCATCGCATTTGGTGCTCATAGATGGGTTGCAACTCTCAAGAGGCATTGTGAATCTCTTGCCATCCCAATGTTTACCGTACCATCTGATTACCCTGCAGACATAAGCCCATCTGGCAAGAGTGGCTTTTTAATGCTCGCGCAGCGGATGTCTGATAGCTTCATGTCCGGAATTTGTCCTTCGTCAGCTTGCAAGTGGGACATCCTTCACATTAGTAACATGGCCAACAACGACAGGAGAATCATGTCCCGGTTAATTCAGGATGCCTCTGGTGAAAATCGTGCAATCGTGCTTCAACTTCTGTTTGGATGCCGGTGTCACGGCAAAAGATGTTTTATTTCCTCCGTGATGCACGAATGA 1059 0.441 MENGAMETAPTSEMIGNDTENERSKLIDLASAAIDEVIKLAQPDSDLWIKSLESGREVLNRDEYEKIRSPIDTPKPNGFVAEASRNTVLLCTNTAALIETFLDADRWSKMFSYIIAKAKTLDVLSNGINGTRNGSMQLMHAEIQLPTPLVPVREYRFIRFCKQHAEGNKWAVVDVPIDFYRDGPNGNPNLSCKRLPSGCILEDMPYGCQITWVDHSQYDESAVHQIYRPLVNSGIAFGAHRWVATLKRHCESLAIPMFTVPSDYPADISPSGKSGFLMLAQRMSDSFMSGICPSSACKWDILHISNMANNDRRIMSRLIQDASGENRAIVLQLLFGCRCHGKRCFISSVMHE* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4343 352 SUPERFAMILY Bet v1-like 21 253 - -
Tpr2g4343 352 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 10 332 IPR042160 -
Tpr2g4343 352 Pfam START domain 29 252 IPR002913 GO:0008289
Tpr2g4343 352 SMART START_1 28 252 IPR002913 GO:0008289
Tpr2g4343 352 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 10 332 - -
Tpr2g4343 352 CDD START_ArGLABRA2_like 23 251 - -
Tpr2g4343 352 ProSiteProfiles START domain profile. 19 255 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4343 Tpr-Chr2 47163462 47165840 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4343 21 331 Homeobox Transcription Factor Family AT3G61150 47.134 3.35e-98 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4343 K09338 - gmx:100785102 356.681