Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4335 TTATCAGAGTATTTATGTTTGTATTTCGTATACCTTGAACTTATGGGACCGAGTCTCGATGACGTCCTTTACTACTGTAGTGGCAAGTTTTCGCTAAAATCGGTTTTGATGTTGGCTGATCAGATGCTTATGAGGATAGAGTTTCTACATTCGAAGGGATTACTGCACAACGATATCAAACCAGATAATTTCCTCATGGGTCTTGGGAAGAAAGCAACTCAGGTTTGTATGATTGATTTTGGACTTTCAAAAGGATATATGGATCCTATCAGTTACAGGCATATCCCTTACAGAGAGAACAAAAACTTAACAGGAACAGCGTGTTATGCAAGTTGCAATACTCATAAAGGAATTGAGCAAAGTCGCAGAGATGATTTGGAGTCTCTTGGCTATGTTCTTTTGTACTTTTTAAGAGGTAGCCTTCCTTGGCAGGGTCTGCAAGCTGCCACCAGAATGCAAAAATATGAAAAATTTTACGACATGAAGTTCTCAACTCGTGTTGAGGTACTTTGCAAGTCATATCCCATGGAGTTTGCGTCTTACTTTCATTATTGCCGCTCCTTGTCATTTGATCAACGACCAGATTATGGATATTTGAAGCGCCTGTTTCGTGAATTGTTCACTTCTAAAGGATATGAGGCTGACTATTTATATGACTGGACGATTTTAAAATATCAGGAGATTCAACAGGCAAAGGAACATAATCTATCAATTGTGCGTGATTCCTTAATTTGCCGAGTTTGA 744 0.3871 LSEYLCLYFVYLELMGPSLDDVLYYCSGKFSLKSVLMLADQMLMRIEFLHSKGLLHNDIKPDNFLMGLGKKATQVCMIDFGLSKGYMDPISYRHIPYRENKNLTGTACYASCNTHKGIEQSRRDDLESLGYVLLYFLRGSLPWQGLQAATRMQKYEKFYDMKFSTRVEVLCKSYPMEFASYFHYCRSLSFDQRPDYGYLKRLFRELFTSKGYEADYLYDWTILKYQEIQQAKEHNLSIVRDSLICRV* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4335 247 SMART serkin_6 4 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g4335 247 PANTHER CASEIN KINASE I-LIKE PROTEIN 11 234 - -
Tpr2g4335 247 SUPERFAMILY Protein kinase-like (PK-like) 8 220 IPR011009 -
Tpr2g4335 247 PANTHER CASEIN KINASE-RELATED 11 234 - -
Tpr2g4335 247 Pfam Protein kinase domain 11 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g4335 247 Gene3D Transferase(Phosphotransferase) domain 1 3 242 - -
Tpr2g4335 247 ProSiteProfiles Protein kinase domain profile. 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g4335 247 ProSitePatterns Serine/Threonine protein kinases active-site signature. 54 66 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4335 Tpr-Chr2 47054352 47056431 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4335 14 147 MAP Kinase Kinase Kinase AT5G55090 28.358 2.60e-10 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Tpr2g4335 Pkinase 2.8e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4335 K08960 K08959 ncol:116247888 364.385