Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr2g4311 | ATGTTTAACACCAACAACACTTTCTCTTCACACCCGTCTACCTCCGACACGTCATTGCCGAATTCAGAGGGTTCTTATGGGATGTCAGTTACCAACGATGAGGTACGGTTAGCTGTGAGTACCCCGAAGAAGCGTGCAGGGAGGAAAAAGTTCAAGGAGACTCGCCACCCGGTATATAGGGGTGTGAGGAAGAGGAACTTAGATAAATGGGTGTGTGAAATGAGGGAGCCTAACAAAAAGACTAAGATTTGGCTAGGGACTTTTCCAACAGCCGAAATGGCAGCCCGAGCACATGATGTTGCCTCAATGGCATTGAGGGGCCGTTACGCCTGTCTCAACTTTGCTGACTCGGCGTGGCGGCTCCCTAAACCTGCCAGCACACAGGCAAAAGATATACAAAAGGCGGCTGCACTAGCCGCCGAGGCTTTTAGACCAGACAAGACTTTAAAGACTAATGATATTGATATGGATGTAATAACTAATAATATTGAAATGGATGTAGGTTCCTCCGCCACAGAGGAGCAGAGTATGGTTTGTATGGAAGAGCATGAAGAGGGAGTGATGAACATGCCAGAGTATTTTAGGGATATGGCGCTAATGTCCCCTACATATAGCTTTGGTTATCATGGGTATGAAGATATTCATGTAGAAGACTTTCAAGATGAAGAGGATTTTAAAAAATGGTTTGCAACCATATGA | 699 | 0.4549 | MFNTNNTFSSHPSTSDTSLPNSEGSYGMSVTNDEVRLAVSTPKKRAGRKKFKETRHPVYRGVRKRNLDKWVCEMREPNKKTKIWLGTFPTAEMAARAHDVASMALRGRYACLNFADSAWRLPKPASTQAKDIQKAAALAAEAFRPDKTLKTNDIDMDVITNNIEMDVGSSATEEQSMVCMEEHEEGVMNMPEYFRDMALMSPTYSFGYHGYEDIHVEDFQDEEDFKKWFATI* | 233 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr2g4311 | 232 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Tpr2g4311 | 232 | SUPERFAMILY | DNA-binding domain | 58 | 117 | IPR016177 | GO:0003677 | |
Tpr2g4311 | 232 | ProSiteProfiles | AP2/ERF domain profile. | 58 | 115 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr2g4311 | 232 | PRINTS | Ethylene responsive element binding protein signature | 59 | 70 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr2g4311 | 232 | PRINTS | Ethylene responsive element binding protein signature | 81 | 97 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr2g4311 | 232 | PANTHER | DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D | 1 | 230 | IPR045277 | GO:0003700 | |
Tpr2g4311 | 232 | Pfam | AP2 domain | 57 | 107 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr2g4311 | 232 | Gene3D | AP2/ERF domain | 58 | 116 | IPR036955 | GO:0003700|GO:0006355 | |
Tpr2g4311 | 232 | PANTHER | CBF/DREB1 TRANSCRIPTION FACTOR | 1 | 230 | - | - | |
Tpr2g4311 | 232 | CDD | AP2 | 59 | 117 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr2g4311 | 232 | SMART | rav1_2 | 58 | 121 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr2g4311 | Tpr-Chr2 | 46639240 | 46643405 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr2g4311 | 36 | 216 | AP2-EREBP Transcription Factor Family | AT4G25470 | 55.729 | 1.45e-61 | 190 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Tpr2g4311 | AP2 | 1.4e-12 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr2g4311 | - | K09286 | mtr:MTR_6g465460 | 282.722 |