Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4302 ATGGGTAAAGGTGGAATGTCAGTTGATGATGATCAACAGAACATGGCTGCTTGGCTTGTTGGTTTAAACACTCTCAAGATTCAACCTTTCAATCTTCCTTCTCTTGGACCACATGATGTCAGAATTAGAATGAAAGCTGTTGGAATCTGTGGGAGTGATGTTCACTACCTCAAGACAATGAGATGTGCCGATTTTATAGTTAAAGAACCGATGGTTATTGGTCATGAGTGTGCTGGGATAATAGAAGAAGTAGGTAGTCAGGTACAGAGTTTGGTGCCTGGTGACCGTGTGGCGATCGAGCCTGGGATCAGTTGTTGGCGTTGTGACCATTGCAAACTTGGTCGATATAATCTTTGCCCTGAGATGAAGTTTTTTGCTACTCCACCAGTTCATGGTTCCTTGGCTAATCAGATAGTACATCCGGCAGACCTATGCTTTAAACTACCAGACAATGTAAGCTTGGAGGAAGGGGCAATGTGTGAACCATTAAGTGTTGGTGTTCATGCGTGTAGGCGAGCTAATATCGGACCGGAAACAAATGTTTTGATTATGGGAGCAGGACCTATCGGACTTGTTACAATGCTTTCGGCTCGTGCTTTTGGTGCACCTAGGATTGTCGTTGTGGATGTAGATGACCATCGTTTATCTGTTGCAAAAAGTCTCGGTGCAGATGACATTGTTAAAGTTTCAACAAACATTCAGGATGTAGCGGAAGAAGTTAAACAGATTCATAATGTTATGGGAGCTGGTGTAGATGTTACCTTTGATTGTGCTGGTTTTAACAAAACCATGACTACAGCATTGAATGCTACTCAACCAGGTGGCAAAGTTTGTCTAGTCGGAATGGGACATTCCGAAATGACTGTGCCACTCACACCAGCTGCTGCAAGGGAAGTTGATGTGGTTGGCATTTTCCGCTATAAGAATACATGGCCTCTATGCCTTGAGTTTATAAAGAGTGGCAAAATTGATGTAAAACCACTTATAACTCATAGGTTTGGATTTTCACAAAAGGAAGTGGAAGAAGCCTTTGAAACAAGTGCTCGTGGTGGTAATGCTATTAAGGTCATGTTTAATCTTTAG 1083 0.4247 MGKGGMSVDDDQQNMAAWLVGLNTLKIQPFNLPSLGPHDVRIRMKAVGICGSDVHYLKTMRCADFIVKEPMVIGHECAGIIEEVGSQVQSLVPGDRVAIEPGISCWRCDHCKLGRYNLCPEMKFFATPPVHGSLANQIVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLSARAFGAPRIVVVDVDDHRLSVAKSLGADDIVKVSTNIQDVAEEVKQIHNVMGAGVDVTFDCAGFNKTMTTALNATQPGGKVCLVGMGHSEMTVPLTPAAAREVDVVGIFRYKNTWPLCLEFIKSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFNL* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4302 360 PANTHER L-IDONATE 5-DEHYDROGENASE 9 360 - -
Tpr2g4302 360 PANTHER SORBITOL DEHYDROGENASE 9 360 - -
Tpr2g4302 360 CDD sorbitol_DH 16 359 IPR045306 GO:0016616
Tpr2g4302 360 Pfam Zinc-binding dehydrogenase 188 319 IPR013149 -
Tpr2g4302 360 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 74 88 IPR002328 GO:0008270|GO:0016491
Tpr2g4302 360 Pfam Alcohol dehydrogenase GroES-like domain 37 148 IPR013154 -
Tpr2g4302 360 Gene3D - 165 305 - -
Tpr2g4302 360 SMART PKS_ER_names_mod 21 358 IPR020843 GO:0016491
Tpr2g4302 360 SUPERFAMILY GroES-like 14 186 IPR011032 -
Tpr2g4302 360 Gene3D - 25 346 - -
Tpr2g4302 360 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 151 324 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4302 Tpr-Chr2 46530579 46534908 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4302 27 293 Monolignol Biosynthesis Gene Families AT4G37980 26.978 2.51e-19 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4302 K00008 - gmx:100820630 677.552